Gene Synpcc7942_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0398 
Symbol 
ID3774919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp392990 
End bp393448 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content53% 
IMG OID637798804 
Producthypothetical protein 
Protein accessionYP_399417 
Protein GI81299209 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACG AACTCAAGTT TTATCTCAAC TTTGGCCATC CACTATTGAT GTGGATTTTG 
CTGGGAGTCA GCCTCTATGC GGGCTATCTC GGCTTCCAAG TGCGCCAACT GCGGTCGGCG
ACTGGGGAAG AGAAAAAGAA ACTGATTCAA GCCAAAGTGA ATCAAAAGCA CTTCCAGTGG
GGCTCACTCA TTCTCGCCTT GATGGTCTTA GGGACTGTGG GCGGCATGGC TGTCACCTAC
ATCAATAACG GCAAGTTGTT TGTTGGCCCT CACTTACTGG CCGGTTTGGG CATGGCCGGT
TTGATCGCTA TTTCCGCAGC GCTGTCCCCA TTCATGCAAA AAGGTAATGA GCTAGCGCGG
GGCACCCACA TCGCCCTCAA CACCGTGATT GTTGGCCTGT TTGCTTGGCA GGCTGTCACG
GGAATGGATA TTGTGCAGCG CATCATCGCT CGCCACTAG
 
Protein sequence
MSDELKFYLN FGHPLLMWIL LGVSLYAGYL GFQVRQLRSA TGEEKKKLIQ AKVNQKHFQW 
GSLILALMVL GTVGGMAVTY INNGKLFVGP HLLAGLGMAG LIAISAALSP FMQKGNELAR
GTHIALNTVI VGLFAWQAVT GMDIVQRIIA RH