Gene Synpcc7942_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0394 
Symbol 
ID3774915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp387354 
End bp388220 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content58% 
IMG OID637798800 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_399413 
Protein GI81299205 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTGGA CCCGCATTCT CAGTGGCACG GTGGCGATCG CGATCGCTCT GGGATTGCTG 
ACGTTGGGCG GCTGGTATTT CACCTGTGGC CTTGGAATTA TGGTCTACCT TGGCCTGGAA
GAATATTTCC AGTTGGTGCG CCTCAAGGGA ATGATGCCGG CGGCACGGAC GACCTTGGTC
GTCAGTCAAC TGTTGCTGAT TGTCGCGAAC CTCAACCCTT CCCTCACCGA TGCGATCCTG
CCAGTAACAG CCATTCTGAT CTGCGCTTGG CTGCAATTTA AGCCCAAGCC CTCCAGCATT
GCCGACATTG CCGCCTCAAT TCTGGGCCTG TTTTACACCG GCTATCTGCC CAGCTACTGG
GTGCGCCTGC GATCGCTCGG ATCGGCTGCC AGTAGTAATC TCCCCCTCGG CGGCTTCTGG
CCCGATCGCT GGCTACCGTT TAACCAATTA CCGCCAGGTC TAGCCCTACT GTTGCTGGCC
TTCCTCTGCA TTTGGGCCGC TGACATCGGC GCCTACTTCA TGGGGCGTTG GTGGGGACGC
ACCAAGCTCA CCCAAGTCAG CCCCAAGAAG ACCGTGGAAG GCGCGATTTC TGGCCTACTT
GGCAGCATGA CCGTCGCCAC TATCGGGGCC TTTTCCTTAG CTTGGCCCTA TCCATTGCTC
ACCGGCTTGG GCTTGGGCCT GATCATCGGC GGCTGTAGCT TGCTGGGCGA CCTAACCGAA
TCGATGATGA AACGGGATGC TGGCGTCAAA GACTCCGGTC AGATCATTCC TGGACACGGT
GGCATCCTTG ATCGCACCGA CAGCTACATC TTTACGGCAC CGATGATGTA CTACTTCGTG
ACGCTGCTGC TACCGCTGTT GCGTTAG
 
Protein sequence
MPWTRILSGT VAIAIALGLL TLGGWYFTCG LGIMVYLGLE EYFQLVRLKG MMPAARTTLV 
VSQLLLIVAN LNPSLTDAIL PVTAILICAW LQFKPKPSSI ADIAASILGL FYTGYLPSYW
VRLRSLGSAA SSNLPLGGFW PDRWLPFNQL PPGLALLLLA FLCIWAADIG AYFMGRWWGR
TKLTQVSPKK TVEGAISGLL GSMTVATIGA FSLAWPYPLL TGLGLGLIIG GCSLLGDLTE
SMMKRDAGVK DSGQIIPGHG GILDRTDSYI FTAPMMYYFV TLLLPLLR