Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0394 |
Symbol | |
ID | 3774915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 387354 |
End bp | 388220 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798800 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_399413 |
Protein GI | 81299205 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTGGA CCCGCATTCT CAGTGGCACG GTGGCGATCG CGATCGCTCT GGGATTGCTG ACGTTGGGCG GCTGGTATTT CACCTGTGGC CTTGGAATTA TGGTCTACCT TGGCCTGGAA GAATATTTCC AGTTGGTGCG CCTCAAGGGA ATGATGCCGG CGGCACGGAC GACCTTGGTC GTCAGTCAAC TGTTGCTGAT TGTCGCGAAC CTCAACCCTT CCCTCACCGA TGCGATCCTG CCAGTAACAG CCATTCTGAT CTGCGCTTGG CTGCAATTTA AGCCCAAGCC CTCCAGCATT GCCGACATTG CCGCCTCAAT TCTGGGCCTG TTTTACACCG GCTATCTGCC CAGCTACTGG GTGCGCCTGC GATCGCTCGG ATCGGCTGCC AGTAGTAATC TCCCCCTCGG CGGCTTCTGG CCCGATCGCT GGCTACCGTT TAACCAATTA CCGCCAGGTC TAGCCCTACT GTTGCTGGCC TTCCTCTGCA TTTGGGCCGC TGACATCGGC GCCTACTTCA TGGGGCGTTG GTGGGGACGC ACCAAGCTCA CCCAAGTCAG CCCCAAGAAG ACCGTGGAAG GCGCGATTTC TGGCCTACTT GGCAGCATGA CCGTCGCCAC TATCGGGGCC TTTTCCTTAG CTTGGCCCTA TCCATTGCTC ACCGGCTTGG GCTTGGGCCT GATCATCGGC GGCTGTAGCT TGCTGGGCGA CCTAACCGAA TCGATGATGA AACGGGATGC TGGCGTCAAA GACTCCGGTC AGATCATTCC TGGACACGGT GGCATCCTTG ATCGCACCGA CAGCTACATC TTTACGGCAC CGATGATGTA CTACTTCGTG ACGCTGCTGC TACCGCTGTT GCGTTAG
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Protein sequence | MPWTRILSGT VAIAIALGLL TLGGWYFTCG LGIMVYLGLE EYFQLVRLKG MMPAARTTLV VSQLLLIVAN LNPSLTDAIL PVTAILICAW LQFKPKPSSI ADIAASILGL FYTGYLPSYW VRLRSLGSAA SSNLPLGGFW PDRWLPFNQL PPGLALLLLA FLCIWAADIG AYFMGRWWGR TKLTQVSPKK TVEGAISGLL GSMTVATIGA FSLAWPYPLL TGLGLGLIIG GCSLLGDLTE SMMKRDAGVK DSGQIIPGHG GILDRTDSYI FTAPMMYYFV TLLLPLLR
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