Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0388 |
Symbol | |
ID | 3774909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 380870 |
End bp | 381991 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637798794 |
Product | glycosyltransferase |
Protein accession | YP_399407 |
Protein GI | 81299199 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.230246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACCT ACCCGACAAC AGCAGCTTCC ATCGGAGGAC TCGTTCCGGC CTCTTCTGAT CTGCTGATCA ATTTGGCCTA TCTCAATCAA GAGGCTACGG GCTTAAGTCA CTACGGTCTG CAACTAGTTC CCCACCTAAT TCGGATTTTG CATCCGGTCT TGCTCTCGCC CTGCAGATGG CCAGGGGCAA CAACCCTGCA GATTCCCAAC AATATGACAG CGATCCAAGG TCTGCAGGGA CATCTGCGAC GGCTCATTTG GACACAGACC CAACTCGGGC AGATCTATCA CCAGATAGGC AGCCGGCTAC TGTTTTCTCC AGTACCAGAA GCGCCGCTAG GACAATCGAT CCGCAAGGTG ATCACGGTGC ATGATCTCAT CCCCCTGCGA TTCCCCAGCC GTTCCTTCTC CACACTGTAT TTCCGCAGTC ATCTACCAAG GCTACTTAAA GAATCAACCC ACATTTTTTG CAATTCCCAA GCCACAGCGC AGGATCTTCA GTCTTTTTAT CAGGTGCCAG AACAGCGTTT GACGATCACG CCTCTCGCCT GCGATCGCCA ACAGTTTCGG CCGCTGCGCC TCGACCGCCG CAACTATTTT GTCTATGTAG GCCGGCTCAA TCCCTACAAG AACCTCCAAC GATTGATCAA GGCCTTTGCC CTGATCCAGC GGCAATTAGA CTGCGAACTC TGGCTGGTCG GCCCCGTTGA TCGCCGTTTT CTGCCAGCAG TGCAGGCCCA GATTGAAGCT CAGGGGCTGA CTGAGGTGGT GCGGTTCAAA AACTATGTCC CCCGGAAAGA GCTACCGATC ATCCTCAACC AAGCGATCGC CCTCGTTCAT CCCAGCCTCT GGGAAGGCTT TGGCCTGACC GTTTTAGAGG CCATGTCCTG TGGAACTCCC GTGCTTGTCG CCGATCGTTC CTCCTTGCCC GAAGTGGTGG GGGATGCCGG TCTGTACTTC GACCCGCTGC AACCGGAAGC GATCGCTGAA TCCATGCAGG CGATTGCTCA AGACTCGGGG CTACAGCAAC GGCTCAGTGC TGCCGCTCTA GCGCGATCGC AGCAGTTCTC TTGGGAGCGG ACTAGCCGGA TTACGATTCA GCAGTTGCAG GCCTTGCTCT GA
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Protein sequence | MPTYPTTAAS IGGLVPASSD LLINLAYLNQ EATGLSHYGL QLVPHLIRIL HPVLLSPCRW PGATTLQIPN NMTAIQGLQG HLRRLIWTQT QLGQIYHQIG SRLLFSPVPE APLGQSIRKV ITVHDLIPLR FPSRSFSTLY FRSHLPRLLK ESTHIFCNSQ ATAQDLQSFY QVPEQRLTIT PLACDRQQFR PLRLDRRNYF VYVGRLNPYK NLQRLIKAFA LIQRQLDCEL WLVGPVDRRF LPAVQAQIEA QGLTEVVRFK NYVPRKELPI ILNQAIALVH PSLWEGFGLT VLEAMSCGTP VLVADRSSLP EVVGDAGLYF DPLQPEAIAE SMQAIAQDSG LQQRLSAAAL ARSQQFSWER TSRITIQQLQ ALL
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