Gene Synpcc7942_0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0373 
Symbol 
ID3774894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp366738 
End bp368024 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content49% 
IMG OID637798779 
Producthypothetical protein 
Protein accessionYP_399392 
Protein GI81299184 
COG category[S] Function unknown 
COG ID[COG2850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.373081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAT TACAAGACTT ATTGGGAAGC CAAAACCTCT CGGTCTTTCT GAGTCATTAT 
TGGGCTCAAC AATCCGTTTA TATCGCTGGA GACAGTTTGC GGTTCCAGTC CTTATTTTCC
TGGAATCACC TCAATGACTT ACTGAACTAT CAAACCTTCC GAGAGTCAGA GTTGCGCTTT
TCCCGCGACG GCGAGTCATT GCCTGCCGGC GATAATCCAA CACTTTGGCG ATCGCGTTTA
CAAGAAGGTG CGACCTTAGT TCTGAATGGC GTTCATCATC GCGTTCCAGC CCTCAAGCAC
CTAGCCACAA ACCTCCGGCA AGAATTCGGC TATCGCTGTC ATATCAATCT CTATAGTTCA
CCGGCACAGC AACAGGGGTT TGACTGTCAC TACGATACTC ATGATGTGCT GATTTTGCAG
ATTGAAGGTG AAAAGGAATG GTTGATCTAT CCAGAAACGC TGCCCTACCC CACGGCTGAT
CAGCCTTCTT ACGATCGCCT TCCTCCTGAA GAACCGCCCT ATCTTCAGCA AGTACTGAGC
CCTGGCGATC TGCTCTACAT TCCACGCGGG CACTGGCATT ATGCAATCGC ACAAGAAACG
GCATCTCTCC ATCTCACGAT TGGCATTCAC ACCGCTACTG GCTTGGACTG GGTCAATTGG
TTGCAACAGC AATTAAGAGA CCAGCCCCAT TGGAGACAGG GATTGCCCCT CGCAGGCTCA
TGCAACTTCG ATCCCCTCAA ACTGCGAGGT CATTTAGAGT CATTGCGCGA TCAACTGATT
ACCTATTTGC AAGAGCCCCA AGCGATCGAT GACTATCTTC AATATTTGAG TTGGCAAGAT
CAGCCCCACC TACCGATCCA ACTCCCTCTA CAACTGCATG GCGATCCCTT AGCGCAGGGC
TTGCTCGGTA AATTTATTTG GTCACCACTC CATTCTCTTC AGTGGCAAGC TGAGGATGAT
CAGATTAAGG TGTTAATTGG TTCTAAGCAG ATGGTCTTTA AAGGACTACC GATCTCCTTA
GCCATGCGAC TTTTTAGTTG CCGTCAATTC ACCCTGATGG ATCTCGGTGA TTGGGCTCCC
GACCTTGATT TTGAGTCAGC GATCGCGCCA CTCCTTCAAA AGCTGATTTT GGCAGGCATT
TTATTCGTCG AAGCTGATCA AGACGCAGAG GTCAGTGAAG TGAGTTCGCT TGCTGAAGTA
AGTAAGGCCC CAACTGCTGG AGGAACAGTA ATAATCCAGC CCGATGACGT GAGGGAGCGA
TCGCCAATTC CAAAGCTTTA TACATAG
 
Protein sequence
MNKLQDLLGS QNLSVFLSHY WAQQSVYIAG DSLRFQSLFS WNHLNDLLNY QTFRESELRF 
SRDGESLPAG DNPTLWRSRL QEGATLVLNG VHHRVPALKH LATNLRQEFG YRCHINLYSS
PAQQQGFDCH YDTHDVLILQ IEGEKEWLIY PETLPYPTAD QPSYDRLPPE EPPYLQQVLS
PGDLLYIPRG HWHYAIAQET ASLHLTIGIH TATGLDWVNW LQQQLRDQPH WRQGLPLAGS
CNFDPLKLRG HLESLRDQLI TYLQEPQAID DYLQYLSWQD QPHLPIQLPL QLHGDPLAQG
LLGKFIWSPL HSLQWQAEDD QIKVLIGSKQ MVFKGLPISL AMRLFSCRQF TLMDLGDWAP
DLDFESAIAP LLQKLILAGI LFVEADQDAE VSEVSSLAEV SKAPTAGGTV IIQPDDVRER
SPIPKLYT