Gene Synpcc7942_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0346 
Symbol 
ID3774867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp339352 
End bp340131 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID637798752 
Producthypothetical protein 
Protein accessionYP_399365 
Protein GI81299157 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAG ATGCTAACCC TTGGTTCTGG CAGGCAACAG CCACTGGCAC CTATCTCCGT 
TGCCAACTGC TAGCTGACTT TGAGCATGGT TTTTTTACTC GTACTTTTGC GCCAGCTGAA
CCGCATCAGT TGCAACCGTT GCTCAATCCC CAAGCCTCGG TGCATCGGGT CAAGCAAGTC
CATGGCAATA AAGTTTTGCC GGCAACGATC GCGCCGCACT CTGCTTCACC CCTGTCCGAA
GCGGATGGCC TCTACAGTGA GGCGGCTGGT CAATCTCTCT GGGTCTGTTC GGCTGATTGC
ACACCAGCAC TCGTCGCTGA TCTCAAACAG GGCAGTGTTG CAGCAGTGCA TGCGGGCTGG
CGAGGCACGG CGGCGGGCGT CCTGCGCATT GCGGTTCAGC AGTTGCTAGC CCAAGGCAGC
CAACCCGAAG ATCTGCGTGT CGCCCTTGGC CCTGCGATCG CGGGTGAGGT CTACCAAGTC
GAGCCGCAAG TCGCTCTCCA GACCCTGCAG TCGTTAGCGC CGGAGCTGAC CGATCCCCAA
GCCTTTCTGA CAGGATCAAC TCCGGCAGTC TTGCCTGATT CCGCAGCCGA TCGCCTGCGC
TTGGATGTGC GCCAAGTCAA TCGACACCAG CTGTTGCAAC TAGGGCTCAG CGATGCCCAA
ATCTCGATCG CGCCGCACTG CACCTTCCAG GACGAAGCCC ATTTCTTCTC CTATCGCCGC
AGCAATCAAC GTCAAGTGCA ATGGTCCGGC ATTGTCAGCC AAGCGGGCGA TCGCCGCTAG
 
Protein sequence
MIADANPWFW QATATGTYLR CQLLADFEHG FFTRTFAPAE PHQLQPLLNP QASVHRVKQV 
HGNKVLPATI APHSASPLSE ADGLYSEAAG QSLWVCSADC TPALVADLKQ GSVAAVHAGW
RGTAAGVLRI AVQQLLAQGS QPEDLRVALG PAIAGEVYQV EPQVALQTLQ SLAPELTDPQ
AFLTGSTPAV LPDSAADRLR LDVRQVNRHQ LLQLGLSDAQ ISIAPHCTFQ DEAHFFSYRR
SNQRQVQWSG IVSQAGDRR