Gene Synpcc7942_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0330 
Symbol 
ID3774851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp327394 
End bp327900 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content53% 
IMG OID637798736 
Producthypothetical protein 
Protein accessionYP_399349 
Protein GI81299141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.214626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCATA TTTTGCCAGC AGAACCGCTC GGTTCTGTCC GACCTGTGAG TTCCTCTGAA 
AGTTCTGTCC AGGATCCTGC GATCGAGGCG ATTGCTTCAG CCGCAACCGA ACCCGAAACA
GAAACGGTCA CTGAACCTCA ATCGGATTCG ATGGCAGAGT ACTACGCGCT GCAGCGTCAA
CTGTTGCAGG TCACGTTAAT TTGCACAGTC GTTATTTTCG GAGCGGTCTG GTGGGCCTAT
AGCCTTAACA CTGCTGCTAG CTATTTGCTG GGGGCAATGG GTGGGCTTCT CTACCTCCGG
ATGCTTGGGA AAGCGGTTGA GCGGATTGGT GAGCGCCGTC GCCAGTTTGG GAAATCACGT
CTAGCGCTCT TCGTGGTGCT CATTGTTTTA GCAGCACGAT GGCAATATCT GGAACTGATG
CCGGTCTTTT TAGGTTTTTT GACCTACAAA GCAGCCCTGA TCTGGTACAC CCTGCGAGCT
GTGATCCCAA CTGCTGAAAA CAGTTGA
 
Protein sequence
MRHILPAEPL GSVRPVSSSE SSVQDPAIEA IASAATEPET ETVTEPQSDS MAEYYALQRQ 
LLQVTLICTV VIFGAVWWAY SLNTAASYLL GAMGGLLYLR MLGKAVERIG ERRRQFGKSR
LALFVVLIVL AARWQYLELM PVFLGFLTYK AALIWYTLRA VIPTAENS