Gene Synpcc7942_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0312 
Symbol 
ID3774833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp311280 
End bp311708 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content59% 
IMG OID637798718 
Producthypothetical protein 
Protein accessionYP_399331 
Protein GI81299123 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTA TCGATCTTCC GCTCGATCGC GCCGGTGAGG CCCTCGTGGC TGCTTGGTGC 
CGCGATCGCC GGCTGGAAGT TCTGGCAGAG CGCTGGCATT GCCGCTGGGG CGAACTCGAC
TTGGTGACTC AAGAGGACTC AGCGCTTCGC TTCATCGAGG TCAAAACTCG ACGTCAGACC
GGTTGGGATC AGTCGGGGTT ACTGGCCATC GGCCCAGCCA AGCAACGCTG TCTTAGTCGT
GCTGCAGCTT GCTATCTCGC CAGTTTAGGA AACCAGGCAG CTGTTGCCTG TCGCTTTGAT
GTTGCCTTGG TTCGCTATCG TTCAGAGCCC TCTGCAGCAG CAGTCAAGGT CGCGGCTTGG
GGCCAAGGCT ATCTAGAACT CTGGTGCTAT CTGCCTGATG CCTTTAGCGC CGTCGAGTCA
GGCTGGTAG
 
Protein sequence
MQVIDLPLDR AGEALVAAWC RDRRLEVLAE RWHCRWGELD LVTQEDSALR FIEVKTRRQT 
GWDQSGLLAI GPAKQRCLSR AAACYLASLG NQAAVACRFD VALVRYRSEP SAAAVKVAAW
GQGYLELWCY LPDAFSAVES GW