Gene Synpcc7942_0284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0284 
Symbol 
ID3773846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp280701 
End bp281009 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content53% 
IMG OID637798690 
Productcarbon dioxide concentrating mechanism protein CcmK 
Protein accessionYP_399303 
Protein GI81299095 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATTG CTGTCGGAAC GATTCAAACC CTCGGATTTC CGCCGATTAT TGCTGCGGCA 
GATGCGATGG TCAAAGCGGC TCGGGTCACC ATCACCCAGT ATGGATTGGC GGAAAGTGCC
CAATTCTTTG TCTCGGTGCG GGGACCTGTT TCGGAAGTCG AAACGGCTGT TGAAGCAGGG
TTGAAAGCAG TTGCTGAAAC CGAAGGGGCA GAGCTGATCA ATTACATCGT CATCCCGAAT
CCACAAGAAA ACGTGGAAAC GGTGATGCCG ATCGACTTCA CGGCTGAATC CGAGCCCTTT
CGGTCTTAA
 
Protein sequence
MPIAVGTIQT LGFPPIIAAA DAMVKAARVT ITQYGLAESA QFFVSVRGPV SEVETAVEAG 
LKAVAETEGA ELINYIVIPN PQENVETVMP IDFTAESEPF RS