Gene Synpcc7942_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0251 
Symbol 
ID3773814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp247110 
End bp247880 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content58% 
IMG OID637798657 
Productexonuclease 
Protein accessionYP_399270 
Protein GI81299062 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGTC ATTGGCGAAG TCACGATTGG CTGACTTACT ACCGCAGCCT TGCTGCGGCG 
ACTTTCACGG TCGTGGATGT CGAGACGACG GGGTTTAAGC CGCCGCAGGC GCGGGTAATT
GAGCTGGGGA TTCTGCAAGC GACCCTTGCT GAAGGCATCC AGTTTCAACA GGCGGAACTA
CTCAATCCGG GCATCCCGAT CCCCGAGGCG ATCGCCCAGT TCACCGGCAT CACAACGGAT
TTGATTGCGA CCGCTGATCC GCCAGAATCT GTGCTGCCCC CCTTGCTACC ACGGCTTCAG
ACCGGAATCT TGGTGGCGCA CAATCTGCCC TTTGACTACC GCTTCCTGAC AGCGGAATAT
CAGCAGCTGG GCTTGGACTT CGAGCGATCG CCTACAGAAC AACTTTGCAC CGTGCAAATG
TCACGCCAAC TCTTAGCTGA CCTACCGTCG CGGAGTCTGC CCCAATTGGT TCAGCACTTT
GGTTTTCCGG TGGGGCAAAG CCATCGGGCG GCCGCTGATG TTGAAGCCTG CTGGCAACTC
TTGGCTCTGC TCTTGCAGCA AATCCAAGAC AGTGAGGATC AGGTAATCCT GGAGCGACTC
GGGCAGGAAT GGCTACCGCT GCCGCTGGCT GCACAACTGC TGGATTGCTC CCGAAGCCAA
GCACAAAAAC AGCTAGAGAC CTTGGCATCG GTTGAGCCGC GGTACTCTAG CCGCAATAGT
ACGCCTCTGT ATCGGCGGGT TTGGGTGGAG GCGCTACTGC CCAACACTTA G
 
Protein sequence
MRSHWRSHDW LTYYRSLAAA TFTVVDVETT GFKPPQARVI ELGILQATLA EGIQFQQAEL 
LNPGIPIPEA IAQFTGITTD LIATADPPES VLPPLLPRLQ TGILVAHNLP FDYRFLTAEY
QQLGLDFERS PTEQLCTVQM SRQLLADLPS RSLPQLVQHF GFPVGQSHRA AADVEACWQL
LALLLQQIQD SEDQVILERL GQEWLPLPLA AQLLDCSRSQ AQKQLETLAS VEPRYSSRNS
TPLYRRVWVE ALLPNT