Gene Synpcc7942_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0229 
Symbol 
ID3775837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp225658 
End bp226221 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content50% 
IMG OID637798635 
Producthypothetical protein 
Protein accessionYP_399248 
Protein GI81299040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.318648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATAG CTCGCGTTAG TTTAGCCGCA ACGGCTGCGA TCAGTTTCGT TGCCCTTTCA 
GCACCCTTCT CTTGGGCGGG TGAGCGCGTT TGCCAAGGAT CGCTCGGCGC AGTCACTGTG
GATAATCTGA AGGTGCCGAC AGGGAAAACC TGTACCCTCA ATGGTACTCG TGTTCAAGGC
AATATTAAAG TTGAATCCCA AGCGAATCTG AAAGCCAATC GAGTCCAAGT TGAAGGTGAT
ATTCAAGCGG ATCGGGCGAG AAATATTGAA GTCTCACAAG GCTCAGTTAT TGGTGGCAAT
ATTCAAATCA AACAAGGCTC AAACGCTCGA GTGGTGAATA CTCGGATCGA AGGCGATCTG
CAGTTGGAAT CTAATTCGGG TCGTTTAGTT GCTGATCAGA ATCGGATTGG TGGCAATTTA
CAAGCCTTTC AGAACCGTGG TGGCTTGGTC ACTCAGCGCA ATACGATCGA TGGCAACTTG
CAATGCAAGA GCAACACGCC CAGCCCTACG GGTAGCGGCA ATGTTGTGCG CGGCGATAAA
GAGGATCAAT GCGCTCGCCT CTAG
 
Protein sequence
MQIARVSLAA TAAISFVALS APFSWAGERV CQGSLGAVTV DNLKVPTGKT CTLNGTRVQG 
NIKVESQANL KANRVQVEGD IQADRARNIE VSQGSVIGGN IQIKQGSNAR VVNTRIEGDL
QLESNSGRLV ADQNRIGGNL QAFQNRGGLV TQRNTIDGNL QCKSNTPSPT GSGNVVRGDK
EDQCARL