Gene Synpcc7942_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0195 
Symbol 
ID3775803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp195630 
End bp196058 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content56% 
IMG OID637798601 
Producthypothetical protein 
Protein accessionYP_399214 
Protein GI81299006 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.673966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCT CAATCCTTTT GGGATCTGCC CTTGCCCTTC TCTTGATTGC ACCCCCCCTG 
CGAGCCGAGA ATCCAGTTCA GGTTCGCCAG CTTCTGGAAA CCGGAGCCTG TGCTGGCTGT
GATCTTCAGG ATGCAGATTT GACAGGTGCT CACTTGATTG GAGCTGACCT GCGCAATGCC
GATTTAGCCG GTGCCAATTT GACTGGCGTG AATCTCGAAG GCGCTGATCT CACCGGTGCT
GATTTAACAG GAGCCAACCT CAGTCGGGCC TACCTGACCA ATGCTGTCTT CGCGGATGCC
GATCTCCGGA ATGCAAACCT CAGCGGCGTC ACGATGTATC ACGCCGATGT GAGCGGGGCA
CAACTGTCGG GCATCAACCT TGCTGGTGCC ACACTTGGCG GGACTGCCAT CAATATCGGC
GGCCAGTAA
 
Protein sequence
MKASILLGSA LALLLIAPPL RAENPVQVRQ LLETGACAGC DLQDADLTGA HLIGADLRNA 
DLAGANLTGV NLEGADLTGA DLTGANLSRA YLTNAVFADA DLRNANLSGV TMYHADVSGA
QLSGINLAGA TLGGTAINIG GQ