Gene Synpcc7942_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0179 
Symbol 
ID3775787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp176742 
End bp177095 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content49% 
IMG OID637798585 
Productsecretion chaperone CsaA 
Protein accessionYP_399198 
Protein GI81298990 
COG category[R] General function prediction only 
COG ID[COG0073] EMAP domain 
TIGRFAM ID[TIGR02222] export-related chaperone CsaA 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGGTGC ATCCCATAGA AACTATTACC TTCGACAAGT TTCTGAAGGT TGAGCTTCGT 
GTCGGCAAGA TTGTTGATGC AACTGAGTTT GTGGGTGCGC GGAGGCCAGC CTACATCCTG
CATATCGACT TCGGTGAAGA GATTGGTGTC AAGAAATCAA GTGCGCAGAT CACCGCACTC
TACAAGCCGG AAGAACTGAT CGGTGGGCTT GTCGTAGCAG TGGTCAACTT TCCATGTAAG
CAAATCGGTC TGCTTATGTC TGATTGCCTT GTCACGGGAT TCCAGAGCGA GAACAGAGAA
GTAGCGCTCT GCATCCTTGA CAAGTCCGTT CTGCTGGGCT CAAAATTGCT TTAA
 
Protein sequence
MEVHPIETIT FDKFLKVELR VGKIVDATEF VGARRPAYIL HIDFGEEIGV KKSSAQITAL 
YKPEELIGGL VVAVVNFPCK QIGLLMSDCL VTGFQSENRE VALCILDKSV LLGSKLL