Gene Synpcc7942_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0163 
Symbol 
ID3775771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp163761 
End bp164510 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content55% 
IMG OID637798569 
Producthypothetical protein 
Protein accessionYP_399182 
Protein GI81298974 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA TGCAACCAGA ACCCTCGTTT GCGGCGGTCC AAATAACGTT TAGTCAGGGC 
TGGCAGGTTT ACGACAAGAT CTTGCAGTAC GACTACATGG ATCACCAGCA GGTTTACGGC
ATCCTGCGAT CGCACTATCA AAGCCTGACA GAACCCTTTG ATCTATTGGA ACTGGGTTGT
GGCGATGCCA GTCAATCGGT GCCTGCGCTG CAAGGCAGTT TGATTCGTAG CTATCGCGGG
GTCGATCTTT CCGCAGTCGC GCTCCAACTG GCTGAAGCCC AGGTCAGCCG GCTCCAGGTG
CCGGTGTTGC TGCAGGTGAG TGAATTGCTG GACTATCTGC AATCCTGTCG TGATCGCTTC
GACCAAATCT TGGTCGCCTT CGCGGTTCAC CACCTCAGCG CGAAACAGAA ACAAGCCTTT
TGGCAAGCCG CTGGGCAATG TCTGCAGCCT GGCGGCCAAC TATTGCTTGC AGATGTCTTT
CGGCTTCCCA ATGAAAGTCG AGGCCAGTAC CTTGATCGCT ACCAGCAACT CATGCAAGGC
CAATGGTCTG CCATGACGGC GACTGAGCAG GAGTTTATCA ACACCCACAT TCGCCAGAGT
GATTTTCCTG AGACTGACGC TGAGATGCAG GCTTGGGCGC GGGCCGCTGG GTTTACGGCG
ATTGACTGTC TCTATTTCGG CAATGCCGAT ACCCAAAAGA TTTGGCGCTG CAGCCGCCCT
GAGGGCAACA AAAGGGCTGG GCTAGAATAG
 
Protein sequence
MSEMQPEPSF AAVQITFSQG WQVYDKILQY DYMDHQQVYG ILRSHYQSLT EPFDLLELGC 
GDASQSVPAL QGSLIRSYRG VDLSAVALQL AEAQVSRLQV PVLLQVSELL DYLQSCRDRF
DQILVAFAVH HLSAKQKQAF WQAAGQCLQP GGQLLLADVF RLPNESRGQY LDRYQQLMQG
QWSAMTATEQ EFINTHIRQS DFPETDAEMQ AWARAAGFTA IDCLYFGNAD TQKIWRCSRP
EGNKRAGLE