Gene Synpcc7942_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0161 
Symbol 
ID3773501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp162764 
End bp163306 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content60% 
IMG OID637798567 
Producthypothetical protein 
Protein accessionYP_399180 
Protein GI81298972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGACT CGAAGGGTCG AGTCGCAAGC GCTGCCGTGA GCCTGGCTGA ATTTTTGGAA 
TCTTGTGCGG GCAAGTGGTT TTCCCAGCGC ACGAGCTATC GTCTCGGGGC TACCCAAGAC
TGGCATCAGT CTGACCAAAC TACCCTGTTC GTTGATTTCC TCGCAGCGGA TGCACCAGAA
CTCCAAGCTC TGATAGCTGA GCAAGGCCTC GCCATCGCTG CTCTCCAGAG TCGTTGGGAG
GCAACCCCCC AACAGCCAGC CAGCACGAGT CTGTTGGTGT TCCTAGCCGA GGGCGATCGG
CTCGTACATC AGCGGGGCGA TCGCTGCTGG CAGGGGCGCT ACCAGTTTGA AGGCGACCAT
CGGGGCCTGA CGCTGACCAC TGAGCAGCCC GATGGGCAGG TAGAAGAACG GTTTTGGTTT
GCCCATCCCA ACCTGCGCTT GCGGACTAGC TTGATTCGCG ATCGCACGGG CCTCAGCCGC
AGCTCTTTCT ATTCTGAGAT TCGGCTCGGC GTCAAACCGC CTGAACCGCC GGCAGAGGTC
TAA
 
Protein sequence
MGDSKGRVAS AAVSLAEFLE SCAGKWFSQR TSYRLGATQD WHQSDQTTLF VDFLAADAPE 
LQALIAEQGL AIAALQSRWE ATPQQPASTS LLVFLAEGDR LVHQRGDRCW QGRYQFEGDH
RGLTLTTEQP DGQVEERFWF AHPNLRLRTS LIRDRTGLSR SSFYSEIRLG VKPPEPPAEV