Gene Synpcc7942_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0154 
Symbol 
ID3773494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp156340 
End bp156957 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID637798560 
Producthypothetical protein 
Protein accessionYP_399173 
Protein GI81298965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.111648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTC ACTGCTCAGC CCAAAAGCAC GACCTGTTGG CAGCGATCGC TGCTTGTTCA 
CAACCGTGGC AGCCTCAACC GGCGGAGGCA GACCGTATCC TGCGGGCGAT TGCAGAGCTG
GAGGCAATCA ATCCTACGCC TGAGCCCACG ACGGCAACGG CCCTGCTGGA GGGCGACTGG
AAGCTGTTGT TCACCACCAG TTTGGAACTG CTGGGCATCG ATCGCTTACC CCTGCTCGCT
CTGGGTGAAA TTTGGCAATG TCTGCGCCTG AGCGATCGCC GCGTCGTCAA CTTAGCTGAG
GTGCAAAGTC TTCTGGGGAC AGGCTTGGTC AGCGTTGCCG CCCAGTTTGA AGTAGTTTCC
GATCGCCGGC TGGAAGTCAG CTTTCAGCGC CTTGTTTTGG GACTGGAGCG CTTCTTGGGC
TACCGCAATG TGGCGACTTG GGTCGAGCGA CTGGGGCAGG ATCAGCGCAT TTGGACGGGC
ATTGATTTCC CGGTTCAGCC CGGCAATCGG CGTGGCTGGA TTGAGCTGAC GTATCTCGAC
CAAGACCTGC GGATCAATCG CGGCAATGAA GGCAGCGTCT TTGTCTTGCA ACGGCCTGGC
ACTGGTCAAT CCGCATGA
 
Protein sequence
MTAHCSAQKH DLLAAIAACS QPWQPQPAEA DRILRAIAEL EAINPTPEPT TATALLEGDW 
KLLFTTSLEL LGIDRLPLLA LGEIWQCLRL SDRRVVNLAE VQSLLGTGLV SVAAQFEVVS
DRRLEVSFQR LVLGLERFLG YRNVATWVER LGQDQRIWTG IDFPVQPGNR RGWIELTYLD
QDLRINRGNE GSVFVLQRPG TGQSA