| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_B2617 |
|---|
| Symbol | |
|---|
| ID | 3772765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007595 |
|---|
| Strand | - |
|---|
| Start bp | 9300 |
|---|
| End bp | 9845 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637798367 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_398715 |
|---|
| Protein GI | 81230336 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1791] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 0.796687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.318237 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTC TGAAAAACCT CAACGGCCAA CTCATCTCTG ACAGCGATCG CATCAATAGT
CTTTTGCAGA TTTGGCGATC GCACCTTTAC TCGATTCGCG ATCGCTTCCA CGGGACCATC
CTCTCGGATA CCACCAAGCT TGATCGCTGG CGCTCATCGA CAGGCTTAGA AGTCACCACC
TGGGGCCAGC GCCTACTCCA AGACCTCAAT CTTTGGAGTG AAGATGCTTG GTGTGAACCC
CTCACCATTC GTCCAGGTTC TCCGCGCTTG CTCAGCTTTT GGGAGCAGCA GCACCACTAC
CACTTTCACT CGGGCCCCGA AATCATCGCG ATCCTGCGGG GAAACTGCAC CTATAGCCTT
GAGGTCGCTC AGGGTAGCGT TCTAGAGATC TGGCTAGAGC CGGGCGATGT TTTGCAAATC
GGTAATTTTC TGCCCCATCA GCTCAGCCTA GGCCCACTGC TAGAGCTGCA AGCAATGCGT
TACTTCAGTA GCCAAGATGG CTGGATCTCT CATCAAAAGA GTTCTATCCC CCAGCCTCAT
CCATAA
|
|---|
| Protein sequence | MAVLKNLNGQ LISDSDRINS LLQIWRSHLY SIRDRFHGTI LSDTTKLDRW RSSTGLEVTT
WGQRLLQDLN LWSEDAWCEP LTIRPGSPRL LSFWEQQHHY HFHSGPEIIA ILRGNCTYSL
EVAQGSVLEI WLEPGDVLQI GNFLPHQLSL GPLLELQAMR YFSSQDGWIS HQKSSIPQPH
P
|
|---|
| |