Gene PMT9312_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1786 
Symbol 
ID3766613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1678752 
End bp1679579 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content28% 
IMG OID637798332 
Productaminotransferase class-IV 
Protein accessionYP_398283 
Protein GI78780171 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.285091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAA CATTAGGCTG GCACAAGGAT CAATGGTTAG ATATTGATAG AATATTTTTT 
GCTGCTAATA ATAGAGGATT AAAATTTGCT GATGGTATAT TTGAAACCAT TTTAATAAAG
GAAAACAAAC CTGTTCTTTT TGATGAACAT CTGAAAAGGT TAGAAAAAAG TAGCAAAATT
TTAAATATTA ATCTCAAAAT AAATAAATTA ACTTTGAGAC AACTTATTAA TGATGGAATT
AGAAATTTGT CGCTTAAGAA GGATCAATTT GCTTCAGTAA GAATAAACTA TAGTCGAGGA
ACTAATCAAG GACGAGCACT AACAATTAAC AGCACTTTAG AGACAAAATA TTTAGATAAT
TTATGGCTTG AATTCTATAG AATAAAACCA AATTTTAATC CGATAAGCGT TTTTATTAGT
CAAACGGAAA AAATAAATGA ATTCAGTCTT ATAAGTAAAT GCAAAACATT TTCATATAAT
CAGGCAATAC AAGTTTTGAC AGAGGCTAAT AAAAAATCAT TCGATGATTC TATCCTTTTG
AATACGTCAG GTGAACTTTG TTGTGGAAGT ACATTTAATC TTCTAATTCA AAGAAATAAT
CAATGGATAA CACCTAGAAA AGAGAGCGGC TGTTTAGAGG GGATTATGGT TTCTAAAGCT
ATAAAATTAA AAATTGTAAA AGAAGAATTA ATTTGTCCAG AATTTCAAAA TGATGACGTA
ATAGTTGCAA TAAATAGCTT ATCTTGCAGA CAAATTAATC AAGTTAATGA TTTAAAGCTT
CAACCTAAAT TCGATCCAAT TTACTTTTGG GATTTATTAT ATAGTTGA
 
Protein sequence
MIETLGWHKD QWLDIDRIFF AANNRGLKFA DGIFETILIK ENKPVLFDEH LKRLEKSSKI 
LNINLKINKL TLRQLINDGI RNLSLKKDQF ASVRINYSRG TNQGRALTIN STLETKYLDN
LWLEFYRIKP NFNPISVFIS QTEKINEFSL ISKCKTFSYN QAIQVLTEAN KKSFDDSILL
NTSGELCCGS TFNLLIQRNN QWITPRKESG CLEGIMVSKA IKLKIVKEEL ICPEFQNDDV
IVAINSLSCR QINQVNDLKL QPKFDPIYFW DLLYS