Gene PMT9312_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1714 
Symbol 
ID3766539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1602247 
End bp1602999 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content32% 
IMG OID637798258 
Productrod shape-determining protein MreC 
Protein accessionYP_398211 
Protein GI78780099 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGATA TCCGACGAAT TTCTACTAGT CGTTGGTGGC ATAAAAAGCA AAGTTGGTTT 
TTCTTCGGAG TTTTTGTATT TTTAGTTTTT GTGAGGATAT CAAAGGGATC TTTTTATAAG
GATTTTTATT ATTTTATTTC AAAGCCGTTT TGGCCTGGTC AATTTCAAAA AGAAGTTATA
CTAGAGAGTA TTGATCAAGA ATCTTTAATA AAGTTAAATC TTCTTAAAAA GGACAATTCA
AGACTGCGGG AAATCCTATC TCTTCAAGAA TCAACTAATA ATGATAATAT TTCAGCTGCA
GTTATTTCTA GAAAAACAGG TAGTTGGTGG AGACAAATAA TATTAAATAA AGGTTCAAAA
GATGGAGTGG AAATTGGTAG TACTGTTATT GGTCCAGGGG GATTATTAGG AAGAGTAAAT
AATACTTCTT TATTTACTTC GTCGGTAACT TTAATAACCT CTCCAGAAAG TAAGTTAGGC
GTTTGGGTGG ATAGAATTCA AATTAATGGA TTACTGGTCG GTTTAGGGTC TGATTTTCCT
AGCTTAATAC TTTTTTCAAA AGATGCTGAT ATTAAAGTCG GAGATTTTGT ATCATCTTCT
CCTGCTAGTA CGTTATTACC TCCAAATATA CCCATTGGTA TTGTCCAATC TATAGATGAG
ACATTTAAAG CAAAAAAAAC GGCAAAAATA TCACTTTTAG CAAAACCTCA CTTAATTGAT
TGGGTGCAAA TTTTAAAAGT CAATATTGAA TGA
 
Protein sequence
MLDIRRISTS RWWHKKQSWF FFGVFVFLVF VRISKGSFYK DFYYFISKPF WPGQFQKEVI 
LESIDQESLI KLNLLKKDNS RLREILSLQE STNNDNISAA VISRKTGSWW RQIILNKGSK
DGVEIGSTVI GPGGLLGRVN NTSLFTSSVT LITSPESKLG VWVDRIQING LLVGLGSDFP
SLILFSKDAD IKVGDFVSSS PASTLLPPNI PIGIVQSIDE TFKAKKTAKI SLLAKPHLID
WVQILKVNIE