Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1714 |
Symbol | |
ID | 3766539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1602247 |
End bp | 1602999 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637798258 |
Product | rod shape-determining protein MreC |
Protein accession | YP_398211 |
Protein GI | 78780099 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGATA TCCGACGAAT TTCTACTAGT CGTTGGTGGC ATAAAAAGCA AAGTTGGTTT TTCTTCGGAG TTTTTGTATT TTTAGTTTTT GTGAGGATAT CAAAGGGATC TTTTTATAAG GATTTTTATT ATTTTATTTC AAAGCCGTTT TGGCCTGGTC AATTTCAAAA AGAAGTTATA CTAGAGAGTA TTGATCAAGA ATCTTTAATA AAGTTAAATC TTCTTAAAAA GGACAATTCA AGACTGCGGG AAATCCTATC TCTTCAAGAA TCAACTAATA ATGATAATAT TTCAGCTGCA GTTATTTCTA GAAAAACAGG TAGTTGGTGG AGACAAATAA TATTAAATAA AGGTTCAAAA GATGGAGTGG AAATTGGTAG TACTGTTATT GGTCCAGGGG GATTATTAGG AAGAGTAAAT AATACTTCTT TATTTACTTC GTCGGTAACT TTAATAACCT CTCCAGAAAG TAAGTTAGGC GTTTGGGTGG ATAGAATTCA AATTAATGGA TTACTGGTCG GTTTAGGGTC TGATTTTCCT AGCTTAATAC TTTTTTCAAA AGATGCTGAT ATTAAAGTCG GAGATTTTGT ATCATCTTCT CCTGCTAGTA CGTTATTACC TCCAAATATA CCCATTGGTA TTGTCCAATC TATAGATGAG ACATTTAAAG CAAAAAAAAC GGCAAAAATA TCACTTTTAG CAAAACCTCA CTTAATTGAT TGGGTGCAAA TTTTAAAAGT CAATATTGAA TGA
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Protein sequence | MLDIRRISTS RWWHKKQSWF FFGVFVFLVF VRISKGSFYK DFYYFISKPF WPGQFQKEVI LESIDQESLI KLNLLKKDNS RLREILSLQE STNNDNISAA VISRKTGSWW RQIILNKGSK DGVEIGSTVI GPGGLLGRVN NTSLFTSSVT LITSPESKLG VWVDRIQING LLVGLGSDFP SLILFSKDAD IKVGDFVSSS PASTLLPPNI PIGIVQSIDE TFKAKKTAKI SLLAKPHLID WVQILKVNIE
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