Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1709 |
Symbol | smpB |
ID | 3766534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1598418 |
End bp | 1598912 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637798253 |
Product | SsrA-binding protein |
Protein accession | YP_398206 |
Protein GI | 78780094 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA ATTCAAACAA AGTTAGAAAA AATACTAATA AAGAAAATAA TTTTAAACGT CTAGCTGAGA ATAGATATGC AAAATTTCAA TATGCAATAT CTGAAACAAT CGAAGCTGGA ATTGAACTTT TAGGAACTGA AGTAAAATCT ATTAGAAACG GAAAAGCAAA TTTAAGAGAT GGGTACTGTT CATTCAGAGA TGGTGAGATT TTATTATTAA ATGTTCACAT TTCACCACAC AAAAATGTGG GGTCTTTCTT TAATCATGAT CCATTAAGAA ATAGAAAGTT GCTACTACAT AAAAAAGAAA TAATTAAGCT GAAATCCAAT ACTGAAAAAA AAGGAATGAC TATTGTTCCC TTATCTATGT ATTTAAAAGG GTCATGGATA AAACTAACTC TTGGTGTCGG TAAAGGGAAA AAATTACATG ACAAACGACA AGATGAAAAA CAAAAAAGTA TAAAAAAAGA AATCAACTCT GTACTAAAAA GATAA
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Protein sequence | MAKNSNKVRK NTNKENNFKR LAENRYAKFQ YAISETIEAG IELLGTEVKS IRNGKANLRD GYCSFRDGEI LLLNVHISPH KNVGSFFNHD PLRNRKLLLH KKEIIKLKSN TEKKGMTIVP LSMYLKGSWI KLTLGVGKGK KLHDKRQDEK QKSIKKEINS VLKR
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