Gene PMT9312_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1671 
Symbol 
ID3766493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1560159 
End bp1561523 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content30% 
IMG OID637798213 
Productsignal transduction histidine kinase 
Protein accessionYP_398168 
Protein GI78780056 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.690264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAC AAATAACTAT AAAAAAAATT CAAGACCTTT TGATTAAAGG AGTTCAAACT 
ATACATGTGG ATGATGATTC ATCCAGAAGA ATGTGGTGGG CTTCTTTAGA AGTTATTCAG
AAAGATTTCC TATCTCAAAA TTATAAACAG GGGGGGATTT GGGTTGCCTC ACCTTTGCCT
GCTTTTAATG ATAAAAAATT TTTAAATCAA TTTTATGGAT GGCTTTGGTC TCCTGAGGGT
TTTCCATATT TTCAGAATAA GAATGCAGGT TTTTTACCAG TCAAAAATTT AGACAAGATA
AAAAAAGATT TCGATTTAGT TAGTAATTAT AAAGTCTTAA ATCTTAGTCA AGAAGATGGT
TATGAACCTT TTTTAATGAT AATCACCCCA AATTTTCAAT GCATATTATC AATTGTAGGA
GAAAAAGATA AGAAAATTTT ATTAATGAAG TGTGATGAAG AAAGCCTTAA ACTTTCAATT
GAATTAATGC ATGCAAAATT AAACCAAGAA AATTATGAGG AAGGAGTAAA ATTTCGTAAT
GCAATCAATA ATTTAGGTAA CCTTAATATT AATAATCAAT TTGAAAAATT ATTTTGGCCA
ACATTATCGG CAAAATTAGC AAATATTGCT CCAAATCATA ATATACAGAA TTCTGTAAAA
AACGATGAAA AAAATGTGCA AATAACTGAA GCAAAATTGT TAAGTGCAAT TTCTCATGAA
GTCAGAACTC CCTTAGCTAC TATAAGAACC CTAATAAGTT CTACTTTAAA AAAATATAAT
ATGGATGAAT CAATGAGAAA TCGTTTGATT CAAATAGATA ATGAATGTAA TGAACAAATT
GATAGGTTCG GTTTAATTTT TAATGCTGCA GAATTAGTAA GTAACGAAGT TACTTCATCA
AATAATTTGG CAAAAATTAA TTTAGCCGAA ATTTTTAAAA AACTTTCTCC TGTATGGAAT
AAACAATTAA ACCGACGTGG GATTTTTTTC AAGATAGACA TCCCCAGTCA ACTTCCGCAA
ATTTTGAGTG ATTCTGAAAA ACTAGAATTA ATGTTAAGGG GATTAATTGA TAAAAATACT
AGAGGATTGA AAGAGGGCAG TACATTAGTT TTAGAATTAA GACCAGCTGG CCAAAAACTA
AAACTTCAAC TAAAAGTACA AAAATCAGAT TGTAATCGAA AAGAAATATT AAAAAAAGAA
AATGGTTCTG ATATAGGTCC TGTTTTAAAT TGGAACCCTC AAACGGGGAG TTTACAACTA
AGTCAAAATG CCACTCAAAA GTTGTTAGCA AGTTTAGGAG GGCATGTTAC TCAAAGGCGT
GATACAGGTT TGACAGTATT TTTCCCCATT TCAGATTCAA AATGA
 
Protein sequence
MKSQITIKKI QDLLIKGVQT IHVDDDSSRR MWWASLEVIQ KDFLSQNYKQ GGIWVASPLP 
AFNDKKFLNQ FYGWLWSPEG FPYFQNKNAG FLPVKNLDKI KKDFDLVSNY KVLNLSQEDG
YEPFLMIITP NFQCILSIVG EKDKKILLMK CDEESLKLSI ELMHAKLNQE NYEEGVKFRN
AINNLGNLNI NNQFEKLFWP TLSAKLANIA PNHNIQNSVK NDEKNVQITE AKLLSAISHE
VRTPLATIRT LISSTLKKYN MDESMRNRLI QIDNECNEQI DRFGLIFNAA ELVSNEVTSS
NNLAKINLAE IFKKLSPVWN KQLNRRGIFF KIDIPSQLPQ ILSDSEKLEL MLRGLIDKNT
RGLKEGSTLV LELRPAGQKL KLQLKVQKSD CNRKEILKKE NGSDIGPVLN WNPQTGSLQL
SQNATQKLLA SLGGHVTQRR DTGLTVFFPI SDSK