| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1626 |
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| Symbol | truA |
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| ID | 3766445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1525038 |
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| End bp | 1525844 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637798165 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_398122 |
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| Protein GI | 78780010 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.895885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAAGGA TAGCTTTATT AGTCCAATAT GATGGATCTA ATTACTCAGG TTGGCAAAGA
CAAAAAAATG CAACTACAGT TCAGGAAACT CTAGAGAGAG CTCTTTTTAA GATTACCCAT
CAAGTCGTAA AGACTTTTGC CGCAGGTAGA ACTGATGCGG GTGTTCATGC ATCAGGGCAA
GTAGTACACT TCAACATTGA TTGTGTTATT CCAGCAAATA GTTATTCTGA TATCTTAAAT
GGTTTGTTAC CCTCAGCAAT TAGAATCTTA GAATCAGTTG AGGTTAAAGA TAGTTGGCAT
TCATGCTATT CAGCAATGTA TAGACATTAT CGATACGTCA TTAATAACAG TAAATTCCCT
AATTTGTTCA TAAATAATTG GTCATGGCAT AGATACCAAA AAATATTAGA TGAAGTTTTA
ATGTCAAATG CATCAAAGCT AATGGAAGGA GAGCATGATT TTTTTGCTTT CCAGAAAAGT
GGAAGTCAAA GGAAAAACTC TATTACAAAA ATAAAAAATG TAGAAATTAA AAGAGTAGAG
GATTTAATTT TAGTTGATAT TAAAGCTACT GGTTTTCTAT ATGGAATGGT CCGTTTAATT
GTTGGTCAAT TAGTGTTAGT TGGAGAGAAA AAAATATCGC CAGAAATTTT TACAGATATA
TGGGTAAACC AAAAAAAAAA TGATGTTAAA GAATCTGCTC CAGCTAAGGG TTTATGTTTT
GTAAATGCTG TTTATGAAGA AAATGTTTTT AAAAAGATCA ATAACAATGA TTTTTTCCCA
GTGTTTTTAA TTAAGGGTTT TTCTTAA
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| Protein sequence | MKRIALLVQY DGSNYSGWQR QKNATTVQET LERALFKITH QVVKTFAAGR TDAGVHASGQ
VVHFNIDCVI PANSYSDILN GLLPSAIRIL ESVEVKDSWH SCYSAMYRHY RYVINNSKFP
NLFINNWSWH RYQKILDEVL MSNASKLMEG EHDFFAFQKS GSQRKNSITK IKNVEIKRVE
DLILVDIKAT GFLYGMVRLI VGQLVLVGEK KISPEIFTDI WVNQKKNDVK ESAPAKGLCF
VNAVYEENVF KKINNNDFFP VFLIKGFS
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