Gene PMT9312_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1594 
SymbolrnhB 
ID3766412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp1492848 
End bp1493465 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content31% 
IMG OID637798132 
Productribonuclease HII 
Protein accessionYP_398090 
Protein GI78779978 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGAAA AAAAAGAAGA AGATCTTCAG CAAGTATTGA ATAAAGTATC CGAAGTTGGA 
ATAGATGAAG TTGGAAGGGG AGCAGTTTTT GGTCCAGTTT TCTCCGCTGT TGTAGTTTTA 
ACTGAAAAAA ATAAATTTAT CTTGAAACAA TTTGGAGTAA AGGATAGTAA AAAATTAACT 
CCTAAAAAAA GAAAATTACT TTTGCCAAAA ATTTTATTAC TTTCTTCAGA TTATGGAATT 
GGGCAATCCT CAGCCAGAGA AATAGATATG CTCGGCATCA GAGTCGCAAC AGAACTTTCA 
ATGATAAGAG CTTTAAAAAA ATTAAAAGAA AAACCATCTG AAATAATAGT TGATGGCCCT 
TTATTGTTAA GACCATGGAA AGGAATTCAG AAAAATATAG TATCAGGAGA CTCGAAAATT 
ACCGCAATAG CTTCAGCAAG CATAGTTGCA AAAGTAGCTC GAGACAATCT AATGGAAAGA 
TTAGAAAAAA AATACTCAGG ATACTTAATA TTTAAAAATA AAGGGTATGG TACCAGGGAG 
CATTTTTCAA ATATCAAAAA AAATGGAATA ACTAATCTTC ATAGGAAAAG TTTTTTAAAT 
CAATCAGATC TTATTTAA
 
Protein sequence
MREKKEEDLQ QVLNKVSEVG IDEVGRGAVF GPVFSAVVVL TEKNKFILKQ FGVKDSKKLT 
PKKRKLLLPK ILLLSSDYGI GQSSAREIDM LGIRVATELS MIRALKKLKE KPSEIIVDGP 
LLLRPWKGIQ KNIVSGDSKI TAIASASIVA KVARDNLMER LEKKYSGYLI FKNKGYGTRE 
HFSNIKKNGI TNLHRKSFLN QSDLI