Gene PMT9312_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1568 
Symbol 
ID3766385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1460771 
End bp1461484 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content29% 
IMG OID637798105 
Productmethyltransferase GidB 
Protein accessionYP_398064 
Protein GI78779952 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 
TIGRFAM ID[TIGR00138] 16S rRNA methyltransferase GidB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.975144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC AAAACATTCC GAAAGAGATT TCTGAATTCA TAACTAAAGA AGAAATAGTT 
ATGTTTCAAG AATTACAAAT TAAAATTGCA GAATTAAACA ATAAAACCAA TCTAACAAGA
TTAATTAAAG GGGATGATTA TTGGATATCT CAAGTATTTG ACAGCATTTG GCCATTTAAA
ACTTTCCCGA ATATTAATTT TGATAATAAA AAGTTTTTAG ATATTGGATC TGGTTGTGGC
TTCCCTGGTT TAGCTTATGC CATAACTCAT CCTAATTCAG AGATATACCT GATTGATTCT
TCAAAAAAGA AAACAGATGC GCTAAAACTC TTAATTAAAG AGATCAATTT CAAAAACAAT
ATTCATATAA TCAATGATCG TATTGAAAAC TTAGCCCATC AATCGTCAAT GAGAAATAGT
TTCAATATAG CTACCACTAG AGCGGTGAGT AATCCATCAA CAGTTTCAGA ATATATACTA
CCAATGCTAA AAAAAGAAGG GTTAGGAGTT TTATATTGTG GCAAATGGAC TGATGAAGAA
AATAAAAATC TGGATAAAAC CTTAGAAATA TTAGAAGGAA AATTTAAAGA GACAAAGAAG
ATTTTGTTAC CAAGAAGTAA AGGTACCCGA AATATTATTC TTATTCAACC TAAAAATTTA
TGTCCTGAAA TTTACCCACG AAAAATTGGC AAACCTGAGA AACATCCATT ATGA
 
Protein sequence
MKKQNIPKEI SEFITKEEIV MFQELQIKIA ELNNKTNLTR LIKGDDYWIS QVFDSIWPFK 
TFPNINFDNK KFLDIGSGCG FPGLAYAITH PNSEIYLIDS SKKKTDALKL LIKEINFKNN
IHIINDRIEN LAHQSSMRNS FNIATTRAVS NPSTVSEYIL PMLKKEGLGV LYCGKWTDEE
NKNLDKTLEI LEGKFKETKK ILLPRSKGTR NIILIQPKNL CPEIYPRKIG KPEKHPL