Gene PMT9312_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1473 
Symbol 
ID3766290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand+ 
Start bp1382796 
End bp1383902 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content27% 
IMG OID637798010 
Productfatty acid desaturase, type 2 
Protein accessionYP_397969 
Protein GI78779857 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0588239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAGG TAAATAGAAG TGATTTTTTA ATAAGGCCAT TTCTAAAAAG AGATAATTTT 
AGAGCTTTCT ATCAAATTAT TTCTACCATA ATCCCAATTA TTTCTATTTG GTTAATTGTT 
TACCAAATAA TAAATCATCC TTTTTCATTA TTAATAAAAG TTTTCTTATT TATACCTATT 
ATTTGTCTTC TAACTCTATT CTCTTCTAGA ACATTCTCAT TAATGCATGA TTGCGGTCAT 
AATTCTCTTT TTACAAAACG TAAGTTAAAC CGATTTTTTG GATTTTTACT TGGTTTGATA 
AATGGTATTC CCCAGAAATC ATGGTCGATT GATCATGCAT TTCATCATAG AAATAATGGA 
AATTGGGAAA TTTACAAAGG TCCGATAGAT GTTTTAAGTC TTGAAGATTA CAATTCCCTC 
ACTAAAAGAG AGCAAATATT TTATAGAGTA AGTCGAAATT GGATAATGCT TTTCCCTGGA 
GGCTTTTATT ACTTAGTTTT GAAACCTAGA TTAGGACTAA TTATTATTAT TTTTAATTTC 
ACTAAAGATA TATTGGGAGA GACTTTTAAC AAAATAAAAA ACAGAGAATT TTTTAAACTT 
TTAGATATTA ATTCAAGAGT CAAACCACCT TTTTCTGATT ATGGAGATAA TTTTAGTGAA 
CTATTTGAAT TAATAATAAA TAACATAGTA GTAATAATAG GATGGATTTT TATGTGCAAA 
TGGTTGGGGT TATTTTTTTT CTTATCATTT TATTCCATAG TTTTAACCCT ATCAGCAGCA 
ATTTTAATAT GTGTTTTTTT CGTACAACAT AACTATAAAA ATGCATATGC TAAAAATACA 
AAGAATTGGG ATATCGTCGA TGGCGCGATT TATGGTAGTA GTAATTTAGA TATACCTAAT 
TGGCTAAATT GGTTTTTAGC AGACATATCC TTCCACAGCA TTCATCATCT CTCTGAGAGA 
ATACCAAATT ACAACTTAAG AGCTTGTCAT AAAGCAAATA GTCATTTACT TAATCAATCA 
AAGTTTTTAA AATTAAGCGA TTTTTCAAAC TGTTTCAAAT TTATTATATG GGACAGTAAA 
GATGAAAAAT TAATACCCAT AAGTTAA
 
Protein sequence
MLKVNRSDFL IRPFLKRDNF RAFYQIISTI IPIISIWLIV YQIINHPFSL LIKVFLFIPI 
ICLLTLFSSR TFSLMHDCGH NSLFTKRKLN RFFGFLLGLI NGIPQKSWSI DHAFHHRNNG 
NWEIYKGPID VLSLEDYNSL TKREQIFYRV SRNWIMLFPG GFYYLVLKPR LGLIIIIFNF 
TKDILGETFN KIKNREFFKL LDINSRVKPP FSDYGDNFSE LFELIINNIV VIIGWIFMCK 
WLGLFFFLSF YSIVLTLSAA ILICVFFVQH NYKNAYAKNT KNWDIVDGAI YGSSNLDIPN 
WLNWFLADIS FHSIHHLSER IPNYNLRACH KANSHLLNQS KFLKLSDFSN CFKFIIWDSK 
DEKLIPIS