| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1432 |
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| Symbol | lpxB |
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| ID | 3766248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1344336 |
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| End bp | 1345514 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637797968 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_397928 |
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| Protein GI | 78779816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.334772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA AGATATTTAT CAGTACCGGA GAAGTCTCTG GAGATTTACA TGGGGGGTTA
TTGTCAAAAG CGTTATTTGA TGAAGCGGAA AAAAAATCTT TAGATTTAGA AATTTGCGGT
TTAGGTGGGG AAAGGATGAA GAAAGAAGGT GTAAAAATTC TTCAAGATAC TACATCAATT
AGTGCAATAG GAATTTGGGA GGCTTTACCT CTTATTATTC CCACAATAAG AATTCAAAAA
AGATTTTATA AATTACTAAA AAAATATCCT CCAGATTGTT TAATTTTGAT TGACTATATG
GGTCCTAATA TAAAAATTGG AAGAAAATTA AAAAGATCGA AGACTAAAAT TCCAATTTTC
TACTATATTG CTCCTCAAGA GTGGGCATGG AGGGTTGGCA ATAATACTAC AACTGATTTA
ATAAATTTTT CCGATAAAAT TTTTGCAATT TTCAGACAAG AAGCAGCCTT TTATAAAAAG
AGAGGTGGAA ATGTCTTGTG GGTTGGACAT CCAATGATCG ATTTGACAAA AAAACTTCCT
TTAAAGAAGA ATGCCAGAAC TATTCTTAAC CTTCGCCCAA ATCAAAACAT TCTACTTTTA
ATGCCCGCAT CAAGACCTCA AGAATTGAAA TATATATTAC CAACTTTTAT GCGGACTGCC
AGAAAATTAC AAAAAAAATA TCCAAGTTTA GTTGTCTATA TTCCTTCCTG CAGGAAAGTT
TTTGATGAAA GATTCAAAAA GGCCTTTAGA AAATATCAAG TTATTGGACA AGTAATTTCT
CAAAAAGATA ACGCAAAATT AAAGCCTTAT ATTTATTCGC TCACTAAAAT AGCTATTTGC
AAATCCGGGA CAGTGAATAT GGAATTAGCT TTATACGGAA TACCACAGAT TGTGGGGTAC
AGAGTAAGTA GGGTTACTGC ATTTATTGCC AAAAAAATTC TTAATTTCAA AGTAAAATTT
ATTTCCCCTG TAAATTTGTT AGTTAATAAG TTAATAATCC CTGAATTTGT ACAGGGAGAC
TTTGATGAAA AGAAAATCTT TTATAAAGCT TGCAGGATTC TGGACCTTAC ATCAGAAAAA
TCAAAAATTA AAAAAGGTTA CACTCTTTTA AAAAAAGAAT TAGGGGAAGA GGGCGTAGTC
CAGCGAGCTG CTAAAGAGAT TATTAATTCT ATTATTTGA
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| Protein sequence | MNKKIFISTG EVSGDLHGGL LSKALFDEAE KKSLDLEICG LGGERMKKEG VKILQDTTSI
SAIGIWEALP LIIPTIRIQK RFYKLLKKYP PDCLILIDYM GPNIKIGRKL KRSKTKIPIF
YYIAPQEWAW RVGNNTTTDL INFSDKIFAI FRQEAAFYKK RGGNVLWVGH PMIDLTKKLP
LKKNARTILN LRPNQNILLL MPASRPQELK YILPTFMRTA RKLQKKYPSL VVYIPSCRKV
FDERFKKAFR KYQVIGQVIS QKDNAKLKPY IYSLTKIAIC KSGTVNMELA LYGIPQIVGY
RVSRVTAFIA KKILNFKVKF ISPVNLLVNK LIIPEFVQGD FDEKKIFYKA CRILDLTSEK
SKIKKGYTLL KKELGEEGVV QRAAKEIINS II
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