| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1386 |
|---|
| Symbol | |
|---|
| ID | 3766198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 1300512 |
|---|
| End bp | 1302077 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637797919 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_397882 |
|---|
| Protein GI | 78779770 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA TTATATGGCC AACAATTGAC TCAAAACATT TAATTGTTGA TTCAAAGCAA
ATGTTGATAC TAGAGAAAGA AATGTTTTCT GATGGGATGC CCCAAGCAGC ATTGATGGAA
AAAGCTGGTA TCCAAATTAG TAGATGGCTT TTAAAAAGGA AACCTCTTCT AAAGAATGGA
ATAACTGTTT TAATAGGTCC TGGGCATAAT GGCGGGGATG GTGCCGTAAT AGCTAGAGAG
CTTTTTTTGC AAGGATATTT AGTTAAGGTA TGGTGTCCAT TCCCAATAAA AAAAACATTA
ACAATTGACC ACGTTAATTA TCTTACATCT ATTGGTGTCA CAAAATTAGA AGAGGCCCCC
GATGCGAATG GGAAAGAACT CTGGATTGAT GCTGTTTTTG GTAACAATCA AACAAGAAAA
GTTGATATTA AATTAATTAA ATTATTTAAT CAGAAATTTC ATAACAAATA TGGCAAGGTA
ATAAGTATTG ATATTCCTAC AGGATTATGT CCTGATAAAG GAGAGCCTGT TTTTGATGAT
GCAGTAAAGG CAGATTATAC TTTAGCTGTA GGTCTTAATA AAATTGGGTT AACGCTAGAT
TCTGCTCTAC CTTTTATTGG AGAATTGAAC CATATTGATG TTGGGGTACC TATTAGTAAA
TTGTCCAATG TTGAAAAAAA GATTTTTAAG GTTACTTACA AAGATTTAAA AAATATTGAT
TTACCTTTTC TACCAAAAAA TTCCAACAAA TATAAAAGAG GAAGAACATT ATTAATCGCC
GGGAGTGAAA AATATCCTGG CGCTGCATAC TTAGCATTAA AAGGGGCCAT ATCAAGTGGA
GCAGGTTTTA TCTCTGCTGT CCTGCCAGAT TTGGTTGCTG AATCTATTTG GCAAGTTGCT
CCAGAAATAG TTTTAAAAGG AACTATGCAA TCTAATCAAA ATGGAAATGC ATCTTTATTA
AGTGCATTAA AGAATATTGA TTTAAGTGCA TTTGATTCAT TAGCTGTAGG TCCAGGGATA
GGAATTGATA GTGATGATTG GGAAAAATCA AAAGACTATC TTTTGAGTTT TGAAGGATTA
TTGATCTTGG ATGCAGATGC ACTCAATAGA ATCTCGGAAT CTAAATTAGG ATCAAAATTT
TTTTTAGGGA GGAAATTCAA AACATGGATT ACACCTCATA GCAAAGAGTT TTCAAGGTTA
TTCCCTAATA TCAAAGGTGA GACTAATGTT GAAATAGCTC TTAATGCAGC AAAAGAATTT
AATATAAGTG TTTTGTTAAA GGGAGCTAAT AGCACAGTCG CTGACAATAA AAAAGCATGG
CAACTTTTTG GAACCGATTC TCAGACAGCC AGAGCAGGAT TGGGTGATCT TTTATCTGGA
TTTGTGGCGG GCAGTTCTGC GATTGATTTA ACCTTTAGTA GAAATATAAC AACCGAATTT
TTTGCTAAAT ATGTACTTTT GCATTCATTT GCTGCATCAA AGTGTAAAAA GGGATCAAAT
GCATCTGCAA TTGGTGATGA ATTATCTAAA CTAATGAGAA ATAGGAAAAC GAGACAAATA
TCTTGA
|
|---|
| Protein sequence | MNEIIWPTID SKHLIVDSKQ MLILEKEMFS DGMPQAALME KAGIQISRWL LKRKPLLKNG
ITVLIGPGHN GGDGAVIARE LFLQGYLVKV WCPFPIKKTL TIDHVNYLTS IGVTKLEEAP
DANGKELWID AVFGNNQTRK VDIKLIKLFN QKFHNKYGKV ISIDIPTGLC PDKGEPVFDD
AVKADYTLAV GLNKIGLTLD SALPFIGELN HIDVGVPISK LSNVEKKIFK VTYKDLKNID
LPFLPKNSNK YKRGRTLLIA GSEKYPGAAY LALKGAISSG AGFISAVLPD LVAESIWQVA
PEIVLKGTMQ SNQNGNASLL SALKNIDLSA FDSLAVGPGI GIDSDDWEKS KDYLLSFEGL
LILDADALNR ISESKLGSKF FLGRKFKTWI TPHSKEFSRL FPNIKGETNV EIALNAAKEF
NISVLLKGAN STVADNKKAW QLFGTDSQTA RAGLGDLLSG FVAGSSAIDL TFSRNITTEF
FAKYVLLHSF AASKCKKGSN ASAIGDELSK LMRNRKTRQI S
|
|---|
| |