Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1350 |
Symbol | |
ID | 3766162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1265645 |
End bp | 1266403 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637797883 |
Product | 2-deoxy-D-gluconate 3-dehydrogenase |
Protein accession | YP_397846 |
Protein GI | 78779734 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.175696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATGT TTTCTGTAAA AAATAAACGT GTATTAGTCG TGGGGGCCTC TAGGGGGATT GGTCTTGAAA TATCAATCAA ATTGAAAGAG GGAAAAGCTG ATATTCTTGG AATTGCTAGG TCTGATATAA ATGCTGATTT TAATTATCTA AGAGTTGATA TCTCAAACAA TAAAGATATC TTATATTTAA ATAAATATAT CGAGCAAAAT AACTTATTTT TTGATGGAAT TGTCGTAAAT TCAGCAATAA GTCAATCTCC CAAAACATTT GATAATAAAG AAAACACTTC TAATAAGCAG AAATTTACAC AAAACCCTAG GAAGTTTGAA TTAATTAATA ATATAAATCT AATTTCTGTT TATGAACTTC TATATACTGT AAGTCCTTAT ATTTCGAAAG ATGCTTCAAT TATTTTTATC TCTAGTATTG GTTCTGAATT GGGATTCCCA GGGAATCCTG GATACCAAAC ATCAAAAGCA GGAATAAACG CCTTAGTGAG AGCATTAGCT GTAGATTTAT CTAGAGATAG AATAAGAGTG AACCATTTAA ATTTAGGATA TATAAATGCA CCAATGAGTA AGGATTCATA CAATGATAAA AAAATGAATA AAGAAAGAAG TGAAAGAACA ATCCTAAAAA GGTGGGGCTC TATAGAAGAT GTAATAGGAC CAGTAATTTT TTTATTATCT AATGAAAGTA GCTATATCAC TGGAACAGGT ATAAATGTTG ATGGTGGGTG GTTATCAAAA GGATTATGA
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Protein sequence | MSMFSVKNKR VLVVGASRGI GLEISIKLKE GKADILGIAR SDINADFNYL RVDISNNKDI LYLNKYIEQN NLFFDGIVVN SAISQSPKTF DNKENTSNKQ KFTQNPRKFE LINNINLISV YELLYTVSPY ISKDASIIFI SSIGSELGFP GNPGYQTSKA GINALVRALA VDLSRDRIRV NHLNLGYINA PMSKDSYNDK KMNKERSERT ILKRWGSIED VIGPVIFLLS NESSYITGTG INVDGGWLSK GL
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