Gene PMT9312_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1334 
Symbol 
ID3766144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1248757 
End bp1249710 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content28% 
IMG OID637797865 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_397830 
Protein GI78779718 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.297801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAAAA ATTTTTTGAT TACCGGTGGT GCTGGTTTTA TAGGTTCTAA CTTAATTAAT 
AAACTTCTAG AAATTCCAGA AAATAATGTT TTTGTATTTG ATAATTTATC AACTGGTAGA
AAAACAAATC TTAAACTGGA TAATAAAAAT TTAAATTTTT ATAATATAGA TCTAAAAACT
CCATATAGAG ATTGGCCTCA ATTAAAAGAA ATTGATACTT TATTTCATTT CGCTGCAAAT
GCAGATGTAA GAGGTGGTGA GATTAATAGA GATATTGATT TTTATGAGAA TGTTATTGTG
ACAAAAGCTA TTTGCGATTA TGCCTCGAAA AATAAAATAA AAAAGGTGGC CTTTTCTAGT
AGTGCAACAG TATATGGAGA GCCAAATATA TTTCCTACTC CTGAGAATTA TTCTTCAACT
CAAACTTCTG TATATGGAGC AAGTAAATTA GCGGGAGAAG CATATCTTCA GGCTTATTCA
GAGTACTTGG ATTTTAAAGT AACTATATTT AGATTCGTTT CTTGGGTTGG TTATGGTTAT
TCTCATGGTG TAATTTATGA TTTTGTAAAT AAATTACTTA AAAATCCAAA TGAACTTTTT
ATTTTAGGTG ATGGGAATCA AAAAAAATCA TACCTTGATG TTAGTGATGG AGTTAATGGC
GTCTTAAATT TAAATGATTT AAATCAAGAA AATTGTAATA TTTTTAATTT GGGTCATACT
GAGATTATCG ATGTAAATAG TTTGGCAAGA ATTATATGTA AGAAATTGGA TTTGATAAAT
ATTAAATTTA ATTATTCTGG GGGTGAAAGA GGCTGGAAGG GTGATTCTCC TTTAGTACAT
TTAGACATTT CTAAAGCTAA AAAATATGGT TGGTCCCCTA AAGTTGATAT AAAAACCGCA
ATCTCCAATA CTGTTGATTA TCTTTTAAGT GACAGAAGAA ATTTATATAG ATAA
 
Protein sequence
MKKNFLITGG AGFIGSNLIN KLLEIPENNV FVFDNLSTGR KTNLKLDNKN LNFYNIDLKT 
PYRDWPQLKE IDTLFHFAAN ADVRGGEINR DIDFYENVIV TKAICDYASK NKIKKVAFSS
SATVYGEPNI FPTPENYSST QTSVYGASKL AGEAYLQAYS EYLDFKVTIF RFVSWVGYGY
SHGVIYDFVN KLLKNPNELF ILGDGNQKKS YLDVSDGVNG VLNLNDLNQE NCNIFNLGHT
EIIDVNSLAR IICKKLDLIN IKFNYSGGER GWKGDSPLVH LDISKAKKYG WSPKVDIKTA
ISNTVDYLLS DRRNLYR