Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1276 |
Symbol | |
ID | 3766084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1184757 |
End bp | 1185542 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637797805 |
Product | ABC transporter |
Protein accession | YP_397771 |
Protein GI | 78779659 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCTTT TATTAAAAGA GGGTATAGAT ATAAACCTTA TTAAAAGTGC ATTCTTAGCA TTCTCCATAA TTGGATTTTT AATAGTTTTA ATAAATATAT TCCCAATATT TAAAAAAAGG CTTCCAAATG CTACTTTGCA GCTTGCAGGC CTAATAGGTA ATACATCATT TCTCGGAATA CCAATTGCAA TAGCACTTCT CCCTACAAAA ACGATAAACT TTACCATTGG ATATGACTTA GGAACAACAC TATTCGCTTG GCTATTTGGG CCTTTTTTAC TTCAAGAAAT CTCGAAGAGC AACAATATCC CAAATTTCAA AAGATTATTA AATGCATTAA TAAATAATCC TGCCTCTAAA GGGATCATTG GAGTACTATT GGCCTACCTT TTCCAAATAA ATGAACTATT AGGAAATTAC CTTTGGATAC CAGCAAGAAT AGTAATTGCA TTGGCAATAA TTATTGTTGG AACAAAACTT GGATTAATAA CAAATCAAAA GGGTAAGATT TTTGATTTTA ATAAAGAAAT TAGATTTTCA ATCTTACTTA AATTATTTAT TCTTCCTTTT ATTATTTTTC TAATAAGTAA ATTTTTAAAT TTTAACTTCT ATCAATCATC AGCTGTAATC CTTCAAGCAG GGACCCCAGC TGCAATATCA AATCTTTTAA TGGCAGAGGC TTATTGCGTA AACCAGAAGA TTGCTTCAAA AATTCTTTTT ACTTCCACTT TGATTTCAAT AGCTACAATT CCTCTTTTAA CAATTTTTAT AAATGCATTT AGATAA
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Protein sequence | MGLLLKEGID INLIKSAFLA FSIIGFLIVL INIFPIFKKR LPNATLQLAG LIGNTSFLGI PIAIALLPTK TINFTIGYDL GTTLFAWLFG PFLLQEISKS NNIPNFKRLL NALINNPASK GIIGVLLAYL FQINELLGNY LWIPARIVIA LAIIIVGTKL GLITNQKGKI FDFNKEIRFS ILLKLFILPF IIFLISKFLN FNFYQSSAVI LQAGTPAAIS NLLMAEAYCV NQKIASKILF TSTLISIATI PLLTIFINAF R
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