Gene PMT9312_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1223 
Symbol 
ID3766030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1139766 
End bp1141115 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content36% 
IMG OID637797751 
ProductSNF family Na(+)-dependent transporter 
Protein accessionYP_397718 
Protein GI78779606 
COG category[R] General function prediction only 
COG ID[COG0733] Na+-dependent transporters of the SNF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTTTGG ACTCAAAGAT TTCTCAAAGA GAACAATGGA CTAGTAAGCT AGGATTCATT 
CTCGCAGCTG CTGGAAGTGC AGTAGGTCTA GGCAACCTTT GGGGTTTTGC TTACAGAGCA
TCTCAAGGAG GAGGTGCTGC TTTTGTACTT TTATATTTAT TGATCGTTTT AATTGTATGT
CTTCCGGTAT TTGTTGCTGA AATGGCATTG GGTAGAAACG CAATGGCAAG CACATTACTT
GCTCCTGTTA AGCTGGCTGG GAAAAATTGG TATCCATTAG GAATTCTTTT CTTCTTAGCT
CCCCTGGGAA TAGCATCATA TTATTCAGTG ATAATGGGAT GGACAGCAGA TACCTTGTTC
CATTCTTTAT TTTTTGGATT ACCGAAAAAT TTAACTGAAG CAGAAACCTT CTTTGGCTCT
ATTAGTAGTG GTAGCAGTGT TTTATTAGGG CACCTATTAA GTCTTGTACT TACAGCAATA
ATAGTTTCAT CAGGTATAAA AAAAGGTATA GAAAAAGTTA CTAGATATTT CATGCCAATC
CTTTTCATAA TTATTGTAAT TCTTGCTATT TGGGCTACTT CTCTTTCAGG GGCTTGGGAA
GGATATAAAA CATTTCTACT TAAGTTTGAT TTTAATGAAT TAAGAAATCC TCAAACAATA
AGAAACGCTT TTACACAAGC ATTCTTTTCA TTAAGCTTAG GGATTGGAAT TATGGTTACT
TACGCCTCGT ATCTAAATAA GAAAAGTAAT CTTCCAAAAC TAAGTGTTGG AGTTGCATCA
TTAGATACTT TGGTTGGACT AATGGCTGGA TTTATAACTT TCCCAATAGT TTTAACATTC
GGTTTAAGTG ACGCTATTTC TGAATCCACA GTTGGTGCTT TGTTCATATC AATTCCAACA
GGCCTAGGTT CATATGGTGC AGCCGGAAGA ATTGTAGCTG TTGCATTTTT TGCACTAGCT
TATATTGCAG CTATAACTTC TTCTGTTTCA TTATTAGAAG TTCCAGTTTC CTCTTTAATG
GATAAATTTG GTTTTAAAAG AGAAAAATCT GTTTGGATGA TAACTCTATT CCTATTCTTA
GCTGGGATTC CTTCTGCATT GAACTTAAAC ATTCTTGGAA CAGTTGATTC GATTTTTGGA
GGCGTATTAC TTATCTTTGG TGGATTCTTA GTAACTTTCT TTATGGGATG GGTCGTTCCA
GGAAAGTTCG ATGAAGAGCT TAGTGACTCA AAAGTTGGAA TCAAAACAAC CCGTTATTTG
AAATTCATGA CAAGGTGGGT TGCGCCTCCA ATTATTGGTT TTGGACTATT TATTAGTGTG
TTTGACTTGC TGAAAGGCTG GGTAAGTTAG
 
Protein sequence
MVLDSKISQR EQWTSKLGFI LAAAGSAVGL GNLWGFAYRA SQGGGAAFVL LYLLIVLIVC 
LPVFVAEMAL GRNAMASTLL APVKLAGKNW YPLGILFFLA PLGIASYYSV IMGWTADTLF
HSLFFGLPKN LTEAETFFGS ISSGSSVLLG HLLSLVLTAI IVSSGIKKGI EKVTRYFMPI
LFIIIVILAI WATSLSGAWE GYKTFLLKFD FNELRNPQTI RNAFTQAFFS LSLGIGIMVT
YASYLNKKSN LPKLSVGVAS LDTLVGLMAG FITFPIVLTF GLSDAISEST VGALFISIPT
GLGSYGAAGR IVAVAFFALA YIAAITSSVS LLEVPVSSLM DKFGFKREKS VWMITLFLFL
AGIPSALNLN ILGTVDSIFG GVLLIFGGFL VTFFMGWVVP GKFDEELSDS KVGIKTTRYL
KFMTRWVAPP IIGFGLFISV FDLLKGWVS