Gene PMT9312_1189 details

Gene Information

• Locus tag: PMT9312_1189
• ID: 3765996
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: -
• Start bp: 1108511
• End bp: 1110295
• Gene Length: 1785 bp
• Protein Length: 594 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637797717
• Product: Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB-like
• Protein accession: YP_397684
• Protein GI: 78779572
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAATA AAGAAATTAT AGTCAGTGAT ATTCAAAAGA GTTTGAATAA TAGAGTTTGT 
GAAGATGCTG GAATAATTCC TGTGAGTATT GAGTTTGGGG TAATTGAAAT AGGAGCAATG 
AATCCAGATT TTATTAGAGT TAAAGAAGTA ATAACTGATA TTAAGAGACG TTTTAATGTT 
GAAGTTGTAT TAAAACAAAT AACTGCATCT GAATGGGAAG AATGGTTTGA AAATAATTCA 
TCAATATCAT TGACTGATGA AAATCAATTA AAAAATGGAA TAGAAGATAC TAGTGATGAA 
ATAAATATCC AATCAAAATC AACTGAAGAT CTTAAGAGTG ATAATCTAAA TGATGAAATA 
GATAATTTTG ATATTGTAGA AAATGAGGAA AACAATAATT CAATAGATAT TAATTATTCA 
AATGAAACTA ATAACTTTCA TTATGAATCC AAAGAAATTA AAGAAAAGCC ATTTGAAGAA 
GATGTTGAAA ACGATAATGC TTTAATTAAA CTCGCACAAA CTAATTTAGG TGAAGATTTT 
GAAAATGATG TAGATAGTTT TTTTGGAGAT GAAATTACAA AATCTAAGGA TCCAGTGATA 
TCTGGTGTTG CATCATTGTT AAGTAAGTGT TTCTCTCTTA ATGCTTCAGA TGTACACATA 
GAACCCCTTG AAGACAGATT AAGAATACGC TATAGAATTG ATGGAATGCT CGAAGAGGTA 
TTCGCTTTCC CAAGATCTCA TATCAGTCCA ATTGTAAGCA GACTTAAGAT AATGAGTAAT 
TTAGACATAG CTGAAAAAAG AATACCGCAA GATGGAAGAA TAAGATGTTT GCTAAGAGGA 
AGAAAGTCTG ATTTTAGAGT TAGCACACTA CCAGGTAAAT GGGGTGAAAA AGTTGTTCTC 
AGAGTTTTAG AAAGCGATAG TTCAGTACTT AATCTTTCAA AGTTAATAAC TGAAAAAAGT 
GAATTAGATT TAATAAGAAT AATGTCTAAA ACTCCCTATG GAATTGTCGT TGTAGTAGGT 
CCAACTGGAA GTGGAAAATC CACTACTTTA TACTCTATGT TGAGTGAATT AAACTCTCCT 
GGAGTCAATA TTAGTACTGT TGAGGATCCA GTTGAATACA CTTTGGATGG TATTCATCAA 
GTGCAAGTAA TTAGAGAGAA AGGTCTTGAT TTCTCAAGAG CTTTGAGATC GTTGATGAGG 
CAAGATCCAG ATATAATTTT AGTAGGTGAG ACTAGAGATA AAGAAACTGC CCAAGCCGCC 
ATGGAAGCAG CATTAACTGG ACATATGGTT TTTACTACTC TTCATGCAAA TGATACTGCG 
ACCGCAATTA CCCGTCTCTC TGAAATGAAT ATTCCTCCAT ATTTGATTGG AGCATCAATC 
ATAGGAGTTG TTGCTCAAAG ATTAGTTAGA AAAGTTTGTT TGTCATGTAG TTCTGTTAAA 
TCTTTAAGTA AAGGGAAAGA TGACAGAGCT ATAAAATATG GATTAAATAA AGCAAGAATA 
ATAAATGAAA CTAGCAATGA CTCAAAGAGT AGATCATGTC CAGTTTGTGG TGGGAGCGGA 
TATAAAGGTA GAGTTGGGAT TTATGAAGTT ATGAAAATAA ATGAAAATTT GCGAGAATTA 
ATTATGAAAG AAAGTACCGC AGATGTAATA AGGTCAAAAG CTTTTTTAGT AGAAGGAAGG 
AGTTTATTAG ATTATGGAAT GGAACTTGTA AAAAAAGAAT TAACTACTAT TGAAGAAGTA 
GAAAGAGTAT GCCTGCTTGA GGAGCCATTA CCTGAGGAAT CATGA 

 

Protein sequence

MVNKEIIVSD IQKSLNNRVC EDAGIIPVSI EFGVIEIGAM NPDFIRVKEV ITDIKRRFNV 
EVVLKQITAS EWEEWFENNS SISLTDENQL KNGIEDTSDE INIQSKSTED LKSDNLNDEI 
DNFDIVENEE NNNSIDINYS NETNNFHYES KEIKEKPFEE DVENDNALIK LAQTNLGEDF 
ENDVDSFFGD EITKSKDPVI SGVASLLSKC FSLNASDVHI EPLEDRLRIR YRIDGMLEEV 
FAFPRSHISP IVSRLKIMSN LDIAEKRIPQ DGRIRCLLRG RKSDFRVSTL PGKWGEKVVL 
RVLESDSSVL NLSKLITEKS ELDLIRIMSK TPYGIVVVVG PTGSGKSTTL YSMLSELNSP 
GVNISTVEDP VEYTLDGIHQ VQVIREKGLD FSRALRSLMR QDPDIILVGE TRDKETAQAA 
MEAALTGHMV FTTLHANDTA TAITRLSEMN IPPYLIGASI IGVVAQRLVR KVCLSCSSVK 
SLSKGKDDRA IKYGLNKARI INETSNDSKS RSCPVCGGSG YKGRVGIYEV MKINENLREL 
IMKESTADVI RSKAFLVEGR SLLDYGMELV KKELTTIEEV ERVCLLEEPL PEES