Gene PMT9312_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1183 
Symbol 
ID3765990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1101022 
End bp1101975 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content32% 
IMG OID637797711 
Productleukotoxin secretion protein-like 
Protein accessionYP_397678 
Protein GI78779566 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTTG ACAACGAAGC AATACTTTAT AAGCCAGCCT CACTTTGGAT AAGAGGATTA 
ATTTGGGCAA TTGTTGGTAG TTTTAGTTTT GGATTTATAT ATGCTTGCTT TGCAAGAATG
GATGAGGTCG TAATAGCAAA AGGCGAATTA CAAGCTTTAG GAGCTGAAAG GCCAATAAGA
GCACCAATAT CAGGAATAGT AAGCGAAATT TTTATAAAAG AAGGTGATTC AGTTGAAAAG
GATTCTAAGC TTTTAAGATT TGATAGTAAT GTTCTACATG CAAAAAAAGA GGGTCTTGAA
GCAAAGTTAG GGGAATTAGA GTCTAGTATT CAATCAGAAA AGGAGATTCT AAAAGAGATA
TCAATTCTTG CTGATGCTGG GGGGATTCAA AAACTTCAAT ACTTACAACA AAAAAATAAA
GTAAGCGAAC TAGGTTATGA AAAAAAACAA GTAGAAGCCG AAATTAAGGA GCTAAATTTT
GATAAATCAA AAACACTTTT AGTTTCACCA GTAAAAGGAA AAGTTTTTAA TCTGATTTCA
GTAAGTAAAG GATTTGCAGC TAATCAAGGC GAAACACTTT TAAAAATAGT TCCAAGTGGG
GACACCGAAG CAAAAATATT TCTCAAAAAC TCAGATATTG GTTTCGTTAA AAGTAATATG
AAAGCAAAAA TAAGAGTAGA TGCATTTCCC TTTACCCAAT TTGGTTCAAT TGAGGGTATT
CTTAAATCTA TTGGTGATGA AGTCATTCGT TCAAATCAAC AGAATCAAAG TTCTCTTTTC
CCCGCCTATG TAAGTTTAGA AAAACAGTAT CTTGAAAAAA ATGGTGAGAA ATTTTTTGTT
AGATCTGGTC AAAGTGTTTC TGTTAATTTA ATTGTTAGAG ATAAAAGAAT AATAAGTCTT
TTAACTGATG CTATAGATAA AGCTATTGAT TCGCTGAGGG GCATTAAAAG TTAA
 
Protein sequence
MDFDNEAILY KPASLWIRGL IWAIVGSFSF GFIYACFARM DEVVIAKGEL QALGAERPIR 
APISGIVSEI FIKEGDSVEK DSKLLRFDSN VLHAKKEGLE AKLGELESSI QSEKEILKEI
SILADAGGIQ KLQYLQQKNK VSELGYEKKQ VEAEIKELNF DKSKTLLVSP VKGKVFNLIS
VSKGFAANQG ETLLKIVPSG DTEAKIFLKN SDIGFVKSNM KAKIRVDAFP FTQFGSIEGI
LKSIGDEVIR SNQQNQSSLF PAYVSLEKQY LEKNGEKFFV RSGQSVSVNL IVRDKRIISL
LTDAIDKAID SLRGIKS