| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1114 |
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| Symbol | |
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| ID | 3765918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1027983 |
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| End bp | 1031609 |
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| Gene Length | 3627 bp |
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| Protein Length | 1208 aa |
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| Translation table | 11 |
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| GC content | 23% |
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| IMG OID | 637797639 |
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| Product | DNA helicase/exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_397609 |
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| Protein GI | 78779497 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0953517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTA ATCAAATTAA TTTAGATAAC AAATTTAAAT TAGTAGAAGC AAGTGCAGGA
ACTGGCAAAA GTTTCACTTT AGCTCACCTG GTTTTAAGAA ATGTTTTGGA GAAAAAAATT
AAACCAGATG AGATACTCTT ATTAAGTTTT ACAAAAAATA CGTGTTCTGA ATTACGAGAT
AAAATACTTT TGAGATTTCA GGATTTAAAA TTATATTTGC AAAATCATAA TGAAAGTAAG
ATAGATAATA CCCTTAAGGA TTGGTATCTA AAATTTAAGG AGAAGGAAAA ATCCAAGAAA
AAAATTATAT CCGAAATTGA TAATTTTGTT AATGAAATTT ACAAGTTACA AGTAACTACA
TTCCATTCTT TTTGTAATAA TATTATTAAT GAATATAGTA TTGAAATAGG TGTAACTCAA
GATCCATACA TTGAGAATAA TATAGATAAT TTGTATAAAG ATGTAATAGA TAATTTGTGG
ATTGATTCTT TTCTTAATCT TAATCATGAG CTTATTTCGG CAGTTAACCA AAAAAAAATA
AGTTCTAGAT TTGGCAGTAG GATCAATAAG TCATTTTTTG TAGGAATTTT AAAAAATATA
GATCAAGAAA ATATCTATAA ATTTGAAATA AATAATAAAT ATCAGATTAT TGATTTAAAT
AACTATTTTA ATGATTTTTT TTATTTAAAT TGGAACGAGT TTTGTGTTGA ATGGAATAAG
AAAGGTAAGG AATTATTTTT ACAACTCATA GAGTTGGGAA AATTAATTAA GGAGAGTGGT
GGTAAAAGTC AAATATATGC AGCAAAACCA AGAAATGATA AGTTTAATCA AATAAATTGT
TGGATTGAAA ATATTAACAA AAGGCTTAAT TCTAAAAATG TGATTGATTT TGTATATGAT
ATTTCTAAAG ATGATCTTTT ATCTAAATAT TTTTACAATG AAAATATATC TAAAGAAATT
AATAAATATA ATCTAAAATT AGATTTTACT AAATTTAATT TATTACAAGA TAAAATTTAT
AAAATAAAAG AAGGTTTCTA TACCGAATTT GTAAGAATAT TTACCCAATT AGCTTATATA
AAATTAATTG AATTAAAGAA AAGTTTTTCT ATTTTCAACT TCAATGATCT TATAAAGACT
GTAGAAAATA AATTTCTAGA TTCAGAAATT AGTAATAGTA TTACTCTATC TAAAATTCAA
AAAAATTTTA AATGTGTCTT AGTAGATGAG TTTCAAGATA CAGATAATAC CCAATGGAAT
TTAATAAAAA AGTTCTTTAA TACTAAAAAT CATTTTTTAC TTTGTGTAGG TGATCCAAAA
CAAGCGATCT ACAAATTTAG AGGTGGAGAT ATTGAAACTT ACTTAGATGC AAGATCTAAT
GCAATCGAAG TTTTTAGTCT TACAGATAAC TATAGATCCT CAAAAAATTT AATTGATGTT
CTTAATAAAC TTTATAAGAA TGGACTTAAA CAATCAAAAC TAAACTATAG GAAATTAACC
TCTAGAATTA ATGAAAATAT TAATTCTGAA TTTAAATTTA AGGATGTATT TGAAATTGTA
GAATTTTCAA AAAAGGAGAC TGATATAGAG GATCTTGTAA CTCATTACAT AGTTAACTTT
ATTTTAAATA ATAAAGAAAT TGATATTAAT AAAATTGCGA TTCTTACATT AAATAATTCG
CAATGCTTAG ATTTAAAAAA AAAATTAAAT CAGTTTAACC TCCCATGCAA AATTCAAAAT
AAACAAAATA TTTTTGATAC AGAAGCAAGT TCTCTACTAT TTTTATTCAT TGAATGTTTA
TTAAATCCGA GGTTTTTAAA AAATATAACT TTACTTGCTG CTTCAAAGTT TATAGAAATA
GAATTAGAAG AATTACTTGA TGATGGAATT AGTAATAATT TAGAAATTTT AATTAATAAA
TGCATTACTT GGTCCCAGGA ACTAAAAGAA AAAGGTTTTT TAAATATTGT TAATGAACTC
CTTATAAATT ACAATTCATC CTCGATTATT CAAGATCTAG ATTTAAATTC AAATTTATTT
CAACTTTCAG AAATTGTTGA AATAGAATTA ATGAATAATG ATTTTAATCT CAATAAAGTT
TTTAACTGGT ATAAAAATCA GTTAGATCAT ATTCTAAGAA TTTGTAGTGG AGAAGATTTT
TTGACGAAAG ATTATAATCT TCAAAATGGA ATAAATCTTT CTACCATTCA TAGTAGTAAA
GGCCTAGAAT TTGAAATAGT CCTATGTCCA TATCTATCAA TTATTTCAAA TAAGTCAAAT
AAAATTAAAG GCCCTCTTTG GAAATCAAAT ATTGATAGAA ACATATACAT TAATATTTCT
AATAATTACG CGAAGGTTGA AAAATTTAAA TTAATAGAAG AAGAAGATTT ATTTAAAGAG
AGTGAAAGGT TAATTTATGT GGCACTTACA AGGAGCAAAT ATAAACTTAT AGTTTTTAAT
GATTTGGAAG ATACAAATAA TATTTTAAAT ATCGATTTAC TTAATAATTT AGAAAATATT
AATAATTATA AGTCTACTTT TGAAGATAGG ATAGAAAAAG AGAAAATAAA AGAAATTTTT
GCTAAGTTCC AAACCAAGAG ATTGAATAAT AATCTTTGGA AAATCCATAA CTTTAATAAA
AAGATATCTA AAGAATTTAA TTCTGATCAA TTTATTTCTT ATTCAAGTTA TTCTTCTTGG
ATAAGTAAAG ATAAAAATAT TGATGCAGTC ATTAATCAAT ATAAGGATTA TGAAGATAAT
ATATCAATTA TCAAAGAGTC TAATCTTAGG AAATCAATGA ATTATCCTAA TTATTTTTCT
TATCCAAATC CCTTAAGTGA ATTCCCAAAA GGAACTATTG CTGGGACTTG TCTGCACAAA
ATAATAGAAA GATTTGAATT TAGAAATAAT AATAATCAAG AATTAATTGA TTTAATTATT
GAGGAATTGA ACTTTCATCA AATCGATACT TCTTTGGCTT TTAAAGTAAA AGATGCGATT
TTGAGAATTA TAAATTTATC TTTAGGAAGT GAATTACAAA ACAAGAAACT AGTGGATATT
CCAAATGATT ACTTAATTAA GGAGCTTAAA TATGATTTAA CTCTATCTTA TGAAGGTAGA
AATATTAATT CTTATGATAT ATCAAAATGC TTTCTTTTAG ATCAGGAATA TGAATTTGGT
GAAGAATATG CAAACAAAAT AAATGATCTT CAAATCATGA ATAAAGGCTT TCATTCAGGA
TGTATTGATT GTGTTTTCCC TGTAGGTAAT AAATTAGAAG ATAGTAAATG GTGGGTAATT
GATTGGAAAA GTAATTTTAT TTCTGGAATT GATAATAGTG ATTGTTTACC AAGAAACTAT
AACTATGAAA ATATGAGAAA TGAAATGATT AAACATCATT ATCCATTGCA ATCTCACCTT
TATTTATTAG CATTGCATAG ATTATTAAAG TGGCGACTTA AAAATTATCA ACCACATATA
CATCTAGGAG GATATATTTA TTTGTTTTTA AAGGGATTGC CAGATTTTGA ATTATTTGAA
AAATCTAAGT CGAAAGATAT ATCGCCAGGT ATTTTTATTG GCAAAGCACC TTTAAAGAGA
ATTAATTATT TAGATAACCT TTTTTAG
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| Protein sequence | MDINQINLDN KFKLVEASAG TGKSFTLAHL VLRNVLEKKI KPDEILLLSF TKNTCSELRD
KILLRFQDLK LYLQNHNESK IDNTLKDWYL KFKEKEKSKK KIISEIDNFV NEIYKLQVTT
FHSFCNNIIN EYSIEIGVTQ DPYIENNIDN LYKDVIDNLW IDSFLNLNHE LISAVNQKKI
SSRFGSRINK SFFVGILKNI DQENIYKFEI NNKYQIIDLN NYFNDFFYLN WNEFCVEWNK
KGKELFLQLI ELGKLIKESG GKSQIYAAKP RNDKFNQINC WIENINKRLN SKNVIDFVYD
ISKDDLLSKY FYNENISKEI NKYNLKLDFT KFNLLQDKIY KIKEGFYTEF VRIFTQLAYI
KLIELKKSFS IFNFNDLIKT VENKFLDSEI SNSITLSKIQ KNFKCVLVDE FQDTDNTQWN
LIKKFFNTKN HFLLCVGDPK QAIYKFRGGD IETYLDARSN AIEVFSLTDN YRSSKNLIDV
LNKLYKNGLK QSKLNYRKLT SRINENINSE FKFKDVFEIV EFSKKETDIE DLVTHYIVNF
ILNNKEIDIN KIAILTLNNS QCLDLKKKLN QFNLPCKIQN KQNIFDTEAS SLLFLFIECL
LNPRFLKNIT LLAASKFIEI ELEELLDDGI SNNLEILINK CITWSQELKE KGFLNIVNEL
LINYNSSSII QDLDLNSNLF QLSEIVEIEL MNNDFNLNKV FNWYKNQLDH ILRICSGEDF
LTKDYNLQNG INLSTIHSSK GLEFEIVLCP YLSIISNKSN KIKGPLWKSN IDRNIYINIS
NNYAKVEKFK LIEEEDLFKE SERLIYVALT RSKYKLIVFN DLEDTNNILN IDLLNNLENI
NNYKSTFEDR IEKEKIKEIF AKFQTKRLNN NLWKIHNFNK KISKEFNSDQ FISYSSYSSW
ISKDKNIDAV INQYKDYEDN ISIIKESNLR KSMNYPNYFS YPNPLSEFPK GTIAGTCLHK
IIERFEFRNN NNQELIDLII EELNFHQIDT SLAFKVKDAI LRIINLSLGS ELQNKKLVDI
PNDYLIKELK YDLTLSYEGR NINSYDISKC FLLDQEYEFG EEYANKINDL QIMNKGFHSG
CIDCVFPVGN KLEDSKWWVI DWKSNFISGI DNSDCLPRNY NYENMRNEMI KHHYPLQSHL
YLLALHRLLK WRLKNYQPHI HLGGYIYLFL KGLPDFELFE KSKSKDISPG IFIGKAPLKR
INYLDNLF
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