Gene PMT9312_1057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1057 
Symbol 
ID3765860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp967481 
End bp968710 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content30% 
IMG OID637797581 
Productmajor facilitator superfamily multidrug-efflux transporter-like 
Protein accessionYP_397552 
Protein GI78779440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.464122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTATTC CAAATAGTTA TCAAATTAGC AAAAATTGGT GGAATCAATT TCCATATCCT 
TTGAGGTTAA TAACCAAGAT AAGATTTTAC GCTGCATTTG GAGCAGGAGG TGTTATTTAT
TTAACATCAC TCATTTTTAA TAATATTGGA TTATCGGCAA CAGATATCGG CTTAGGATTT
ACCATATCAG CAATAATAGG TACGGTAACG AGATTTTTTA CTGGTAATTA TCTAAATAAA
ACAAGCGAAA TACAATTTCC ATTGATTTTT TCATCAATAC TAAGTATTGC TGCTAGCTTA
TTCCTCATTT ATTCGAGAGA TACTTTTTTT TACATAATTG GACAATCATT AGTTGGAGCT
GCTGCAGGTA TATATTGGCC TGCAGCTGAG TTTGGAGTGC CTTATTTTTG CCAAGCGATC
GACACACGAA AAGCTTACGC ACTTGTTAGA AGTTCGGAGG CTTTAGGAAT ATTTTTAGGG
GTATTTTTAG GGGGTTTTAT GACTAATTTT CTGTACTCCA AATCAATTTT TATAAACGAT
ATATTTTGCA TGATAGTTAT TACAACTTTA ATATCGAGGA ATAATTCTTC TATCAAAATA
AACTTAGAAA ATTTACAAAA AAAATTTGTG GATCCAATTA AACAGGGGCA ATTGAAATGG
AACAAAAACT CCGCAATAAT AATTTTATCT ATTTTATTCA TAACTACCTC TTTAGCCTTG
ATTCAAGTAA CTTTACCTTT GGATCTTGTT AAAGGTGGAG TATATAGGAA TGCATTAAGT
ACAGAAATTA CAAGTCTTAT AATTTCTATT CAGTTAATTT TGTTGTTGTT TTTACAATGG
CCTATAGGGT CTTGGATATC AAAGAAAGGT AGGTTATTTG GATTGAAATT TAGTTTAATA
AATTTCTCTT TTGCTTCATT TTTATTATTT ATTTCTAGTT ATTTAAATAT CCCAGCTTTT
TATTTGATTT CTTTTTCATT GATATTAGTT AGTTTAGGCA CTGCTTCATT TCTTCCAACT
TCAACAGATG TAGTTTTTAG AATAGCGCCT TCAAACAAAA AAGGTTTTGC TCTTGCTCTA
TTATCACAAT GTTTCGCTAT GGGTTATTTC TTTGGGCCAT TTATTTCGGG ACGCATATTA
GATCTATTTG GTTATGCTTC AATTATCTGG CTATCTATTT CATGTTGTTG CTTTATGATT
TTTGCAATTC TATTTAAGAG ATTATTTTAA
 
Protein sequence
MIIPNSYQIS KNWWNQFPYP LRLITKIRFY AAFGAGGVIY LTSLIFNNIG LSATDIGLGF 
TISAIIGTVT RFFTGNYLNK TSEIQFPLIF SSILSIAASL FLIYSRDTFF YIIGQSLVGA
AAGIYWPAAE FGVPYFCQAI DTRKAYALVR SSEALGIFLG VFLGGFMTNF LYSKSIFIND
IFCMIVITTL ISRNNSSIKI NLENLQKKFV DPIKQGQLKW NKNSAIIILS ILFITTSLAL
IQVTLPLDLV KGGVYRNALS TEITSLIISI QLILLLFLQW PIGSWISKKG RLFGLKFSLI
NFSFASFLLF ISSYLNIPAF YLISFSLILV SLGTASFLPT STDVVFRIAP SNKKGFALAL
LSQCFAMGYF FGPFISGRIL DLFGYASIIW LSISCCCFMI FAILFKRLF