Gene PMT9312_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1045 
Symbol 
ID3765848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp958377 
End bp959450 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content40% 
IMG OID637797569 
ProductWD-40 repeat-containing protein 
Protein accessionYP_397540 
Protein GI78779428 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATA TAGAACCATT TAGCCCAAGA GGCATGTTCC ACGAGGGATG GACAGCTGAA 
GTTAGCGATT ATGCCATAGC ATGTGGCTGG GCTCTTAAAG GGAAACAATT TATTGTTGGC
GACGTAGCAG GTGGTATTTT TGCATTCGAA GGAGATACTG GAAAAATTAT TTGGAAAAAA
GAAAATACTC ATTCTGGTGG TCTACTAGCA ATGGCAATTC ATCCAGAGGG TGAAATTTTT
GTAACATCAG GTCAGGATGG AAATGTTCAA ATTTGTAATT GCCATGAAGG TAAAGTTATT
AAAACACTTG ATCTTGGCAA AGGTTGGGTA GAACACCTCA AGTGGTCTAA TGACGGTTTA
TTTCTTGCGA TAGCTTCCTC AAAAAAAGTA TATGTATTTA ATGAAATTGG TGAAGAGAAA
TGGATCTCAG AAGACCATCC AAGCACAGTA AGTGCAATAA CGTGGTCAAA TAAAAATGAG
CTAGCAACTG CTTGCTATGG AAGAGTGACA TTCTTTGACA TAGTTAATAA TAAAACGAAT
CAAAAACTCG AATGGCAAGG ATCATTGGTA TCTATGGAAT TAAGCCCTGA TGGAGATATA
GTCGCCTGTG GGAGTCAAGA CAATTCAGTT CATTTTTGGA GAAGATCAAC AGGAATGGAT
GCAGAGATGA CGGGATACCC TGGCAAACCA AGTCACCTTT CTTTTGATGA CAGTGGAAAA
TTACTAGCAA CTAGTGGCAG TGAAAGAATT ACAGTATGGA GCTTTATAGG AAATGGTCCA
GAGGGGACTA TGCCAGGAGA GCTATGTCAC CATACAGAAC CCATTTCGAG CCTAGCCTTT
TCAAATAAAG GTATGCTTGT AGCCTCAGGA TCTAGGGATG GTTCTGTTGT CGCAAGTTTC
CTAAAAAATG ACGGCAATGG AGACCCAGTT GGGGCTGCAT TCGCCGGAGA TTTAGTAGGG
GCAATATCCT GGAGACCTGA TGATTGTGCA CTTGCAGCAG TTAATGCAAA AGGTGTTGTA
AATGTATGGA AATTTAAAGT TCGTACTAAC CTTTTTTCAA AGGGATTTAA GTAA
 
Protein sequence
MPDIEPFSPR GMFHEGWTAE VSDYAIACGW ALKGKQFIVG DVAGGIFAFE GDTGKIIWKK 
ENTHSGGLLA MAIHPEGEIF VTSGQDGNVQ ICNCHEGKVI KTLDLGKGWV EHLKWSNDGL
FLAIASSKKV YVFNEIGEEK WISEDHPSTV SAITWSNKNE LATACYGRVT FFDIVNNKTN
QKLEWQGSLV SMELSPDGDI VACGSQDNSV HFWRRSTGMD AEMTGYPGKP SHLSFDDSGK
LLATSGSERI TVWSFIGNGP EGTMPGELCH HTEPISSLAF SNKGMLVASG SRDGSVVASF
LKNDGNGDPV GAAFAGDLVG AISWRPDDCA LAAVNAKGVV NVWKFKVRTN LFSKGFK