Gene PMT9312_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0983 
Symbol 
ID3765787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp917227 
End bp918021 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content27% 
IMG OID637797508 
Productmembrane protein, multidrug efflux associated 
Protein accessionYP_397479 
Protein GI78779367 
COG category[R] General function prediction only 
COG ID[COG3694] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.594121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAA GAAAATATCT AAAAGTTTAT AAAAAATTCT TACATACTTC TTTGGCTTCT 
GAGTTGGAGT ATAAGACAAA TATATTAATT GATTTAATTA CTGCAATTTT AAGTTTAATA
GGGAGTATTT TTCTATTATC TATTTTCTTT CAAAGTAATG GATATATTGG AGGGTGGAAA
TTTGAACAGG CACTAATAAT TCAAGGTATT TATACAATTT TGAATGGAAT AACTAATACA
TGGTTCAATC CAAATCTTAC AGAAATAGTT AAGCATATTA GAGAAGGAAC CTTAGATTTC
GTACTTTTAA AGCCTATTGA TAGTCAATTT TTCATTTCCC TAAAAAGAAT TAGTCCATCT
GGTTTTTTAG AAATAATGCT TGGATTTTGC TTATTGTTAT ACTGCATCAA AATTAATCAA
ATAAATTTAA ATTTAACCTT TCTTTCTCTA TGTTTAATTA CGATAATCTG CTCAATTTGT
ATCTTATATA GCTTATGGTT TTTTATTTCA ACAACTACTA TTTGGTTTGT TAAAACATGG
AATGCCACAG AAGTATTAAG ATCGTTCCTT TATATTGGAA GATTTCCTTT AAATTCATTT
TCATTTTCAT TAAGAATATT TTTTAGTGTT TTCATTCCTA TTGCATTTAT AACTACAATT
CCCTCCGAAG TTTTCTTAGG TATTTCTCAA TTATGGAAAA TATTGCTTGA AGTTATTGTT
GCTTTAATAT TTTGCTCTAC TTCAAGAAAG TTCTGGTTAT ATGCATTAAA GTTCTACTCT
TCGGCATCGA GCTAA
 
Protein sequence
MNLRKYLKVY KKFLHTSLAS ELEYKTNILI DLITAILSLI GSIFLLSIFF QSNGYIGGWK 
FEQALIIQGI YTILNGITNT WFNPNLTEIV KHIREGTLDF VLLKPIDSQF FISLKRISPS
GFLEIMLGFC LLLYCIKINQ INLNLTFLSL CLITIICSIC ILYSLWFFIS TTTIWFVKTW
NATEVLRSFL YIGRFPLNSF SFSLRIFFSV FIPIAFITTI PSEVFLGISQ LWKILLEVIV
ALIFCSTSRK FWLYALKFYS SASS