Gene PMT9312_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0933 
Symbol 
ID3765735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp868491 
End bp869675 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content23% 
IMG OID637797456 
Productputative ribonuclease II 
Protein accessionYP_397429 
Protein GI78779317 
COG category[K] Transcription 
COG ID[COG0557] Exoribonuclease R 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0603579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGATT TAACTAATTT AAAAACATAT ATTATTGACT CTGAAAATCC ACATGAAGTC 
GATGATGCTA TTTCCTTAGA AATAAAAAAT GGAAATACAA AAAAACTATG GATACACATT
AGTAATCCAT GCAAGTTTTT TTTGCATGAC TCTAATGTTG ATCTCGATGC AAGATTGAAA
AATAGCAGTT TATATTTGAC AGATCAATAT GTTCCAATGC TACCTAAGAA TATTCTTGAA
AAGGCAAATC TAGCTCAAAA TAAAATTTCA GAAACTATTA GTGGAGCAAT AGAATTCAAC
GACGATGGTT CAATTCATAA TTATGAAATA ACTGAAGCAA AAATAAAACC AAAATATCAA
TTAACATATG AAGATGCAAA TGAAATATTA GAATTAGAAC CTAAAGAAGA AATAGAATTA
ATTGAGATAA AAAATTTATT AGAAAAAAGT ATTTCATTCA GAAAAAAACA AGGAGCAATT
ATATTTGAAA GTCCTAATAG TAAAATTAAA TTATATAAGG ATAAAATTAT ACTAAAAAAA
CTAGATAAAA CAATATCACA ATCTATAGTT TCAGAATCAA TGATATTAAT GGGTTATGTA
ACAAGTTTAT TTATAGATAA ATATAATTTA GCAGCTGCTT TTAGGATCCA AAAGTTAAAT
TGCAAACCAC ATGAAATACT TAATAGATAC AATGATAGTG AAATTAAATA TATAATATTA
AAACAATATA TGGGAAGAAG TTATATAACA ACTAAGCCCG GTATCCATGA ATCACTAGGC
CTTAAAATGT ATGTACAATG TACTTCACCA TTAAGAAGAT ATCTTGATTT AATTATACAA
AGACAAGTAT ATAATAAAAT CAATGATTAC GAACTTCTAA GTATAAAATC AGTCTCTGAA
ATTATTGATT ATTCAAAGAA TAGACAATCA GAGAATAATA ATATATTTAA AAATGATAAA
TTTAAGTATT TAAAATTATT TTTTATGAAT GAAAAAAAAC CTTTTTATAA AATAATATTT
GTTAAGTGGA TCAATCATAA AAGAAATATT GCTTTGGTTT ATTTTCCAGA TTATTCACTA
GAAATACTTA TTACTCTTTT TGTATCAATA GAAATATATA GTAATAAAAT ATATAAAGTC
AAATATATTA TAAATGATAG TAATCTTTTA GAATTTATTT ATTAA
 
Protein sequence
MKDLTNLKTY IIDSENPHEV DDAISLEIKN GNTKKLWIHI SNPCKFFLHD SNVDLDARLK 
NSSLYLTDQY VPMLPKNILE KANLAQNKIS ETISGAIEFN DDGSIHNYEI TEAKIKPKYQ
LTYEDANEIL ELEPKEEIEL IEIKNLLEKS ISFRKKQGAI IFESPNSKIK LYKDKIILKK
LDKTISQSIV SESMILMGYV TSLFIDKYNL AAAFRIQKLN CKPHEILNRY NDSEIKYIIL
KQYMGRSYIT TKPGIHESLG LKMYVQCTSP LRRYLDLIIQ RQVYNKINDY ELLSIKSVSE
IIDYSKNRQS ENNNIFKNDK FKYLKLFFMN EKKPFYKIIF VKWINHKRNI ALVYFPDYSL
EILITLFVSI EIYSNKIYKV KYIINDSNLL EFIY