Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0933 |
Symbol | |
ID | 3765735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 868491 |
End bp | 869675 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 637797456 |
Product | putative ribonuclease II |
Protein accession | YP_397429 |
Protein GI | 78779317 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0603579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGATT TAACTAATTT AAAAACATAT ATTATTGACT CTGAAAATCC ACATGAAGTC GATGATGCTA TTTCCTTAGA AATAAAAAAT GGAAATACAA AAAAACTATG GATACACATT AGTAATCCAT GCAAGTTTTT TTTGCATGAC TCTAATGTTG ATCTCGATGC AAGATTGAAA AATAGCAGTT TATATTTGAC AGATCAATAT GTTCCAATGC TACCTAAGAA TATTCTTGAA AAGGCAAATC TAGCTCAAAA TAAAATTTCA GAAACTATTA GTGGAGCAAT AGAATTCAAC GACGATGGTT CAATTCATAA TTATGAAATA ACTGAAGCAA AAATAAAACC AAAATATCAA TTAACATATG AAGATGCAAA TGAAATATTA GAATTAGAAC CTAAAGAAGA AATAGAATTA ATTGAGATAA AAAATTTATT AGAAAAAAGT ATTTCATTCA GAAAAAAACA AGGAGCAATT ATATTTGAAA GTCCTAATAG TAAAATTAAA TTATATAAGG ATAAAATTAT ACTAAAAAAA CTAGATAAAA CAATATCACA ATCTATAGTT TCAGAATCAA TGATATTAAT GGGTTATGTA ACAAGTTTAT TTATAGATAA ATATAATTTA GCAGCTGCTT TTAGGATCCA AAAGTTAAAT TGCAAACCAC ATGAAATACT TAATAGATAC AATGATAGTG AAATTAAATA TATAATATTA AAACAATATA TGGGAAGAAG TTATATAACA ACTAAGCCCG GTATCCATGA ATCACTAGGC CTTAAAATGT ATGTACAATG TACTTCACCA TTAAGAAGAT ATCTTGATTT AATTATACAA AGACAAGTAT ATAATAAAAT CAATGATTAC GAACTTCTAA GTATAAAATC AGTCTCTGAA ATTATTGATT ATTCAAAGAA TAGACAATCA GAGAATAATA ATATATTTAA AAATGATAAA TTTAAGTATT TAAAATTATT TTTTATGAAT GAAAAAAAAC CTTTTTATAA AATAATATTT GTTAAGTGGA TCAATCATAA AAGAAATATT GCTTTGGTTT ATTTTCCAGA TTATTCACTA GAAATACTTA TTACTCTTTT TGTATCAATA GAAATATATA GTAATAAAAT ATATAAAGTC AAATATATTA TAAATGATAG TAATCTTTTA GAATTTATTT ATTAA
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Protein sequence | MKDLTNLKTY IIDSENPHEV DDAISLEIKN GNTKKLWIHI SNPCKFFLHD SNVDLDARLK NSSLYLTDQY VPMLPKNILE KANLAQNKIS ETISGAIEFN DDGSIHNYEI TEAKIKPKYQ LTYEDANEIL ELEPKEEIEL IEIKNLLEKS ISFRKKQGAI IFESPNSKIK LYKDKIILKK LDKTISQSIV SESMILMGYV TSLFIDKYNL AAAFRIQKLN CKPHEILNRY NDSEIKYIIL KQYMGRSYIT TKPGIHESLG LKMYVQCTSP LRRYLDLIIQ RQVYNKINDY ELLSIKSVSE IIDYSKNRQS ENNNIFKNDK FKYLKLFFMN EKKPFYKIIF VKWINHKRNI ALVYFPDYSL EILITLFVSI EIYSNKIYKV KYIINDSNLL EFIY
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