Gene PMT9312_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0884 
Symbol 
ID3765685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp816585 
End bp818084 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content26% 
IMG OID637797406 
Productsmall GTP-binding protein domain-containing protein 
Protein accessionYP_397380 
Protein GI78779268 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.102699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACT TTAAATTAAA GTACATAAAA TATTTTATCT TTATATTATT TCTATATATT 
TTATTTTCGA TATTAACAAG AATAGTAAAT ATTTATACGC TTTTATTTTT AATAATAACT
ATGTATATCT TTTATAATAT TGATAAGAAA TTATTTAAGA AAATAGTTTA TAAAGTTATA
TACAAAAATA AAAAGAATAC ACTTTCATTC AAGAATACAT ATGGTGCTGC AAAGATAAGT
TTGGAAGGGA TTGAGAAAAT AAATAAAAAA ATTAACGATA AAGTAAAAGT TGAATTAATA
AATTACCAAA AAAATAAACT AGAGTCACAA TTAAAAACAG GAGATTATAA AGTTACTCTT
TTTGGAGCAG GTTCCTCTGG GAAAACATCA ATAGCAAGAT CTTTATTAAA AAATATTGTC
GGACAAACTT CAGCGAAAAT AGGGACAACA AAGGAAATTA ATAGCTATAA AATACGTATC
CCAATCTTAA AAAGAAACAT TAATATAATT GATACACCAG GATTATTCGA ACCATCTAAG
TTAGGCGAAG AAAGAGAAAA AACAACAATT ATACAAGCAT CAAATTCTGA CTTAGTACTC
TTTGTGTTAG ATCAGGACAT AAATAAATAC GAAAACTATT TAATTAAAGA ATTATTGAAA
ATAGGAAAAA AAATAATAAT AGTGCTAAAT AAATGTGATT TAAGGTCTTG GGATGAAAAT
AACCTCATCA AAGAAAATAT AATTTCTATA ACTTCAGCTA AAAAAAATAA AATTTCAGTT
GTTAAAACAA TTGCAGTACC TCAACAATCA CCTTATGTAA AATCAGATGC CTTAAATTTA
GTTCCAGAGG TAGGAAGTTT ATTTAAAGAA ATAATTGAAA CGCTCGATAA TAATGGTGAA
GAATTATTGG CAGATAATAT CCTTTTTCGC TCAAATAAGC TAGGTATTAA AAGTAAAAAT
TTCGTACAAG AACAAAGATA CTTAATGTCA AATAAAGTGA TTAATAAATA TATGTGGGTA
ACAGGAGGAG TCATTCTAGT TAATCCACTT CCAGCGGTTG ATTTTCTTAC TACTACATCT
GTTAACCTTC AAATGATAAT GGAATTATCA AAAATATATG AAATAAAGCT TACTAAAAAA
GATGCAAAAG ATTTATCGAA ATCATTGCTA AGCGCATTGG CTAAACAAGG AATACTAAAA
GGTGGGCTAG CCATTCTTTC TCCTGCTTTA GCTACAAGTT TGACGAAAAT AATAATATCT
AAGTCGATAC AATCAATTAC AACAGGCTGG TTAATAAAAA TAGTAGGACT AAGTTTGATT
GAATATTTTA AAAATGGGCA AGATTGGGGA GATGGAGGAA TTCAAGAAGT TGTAGATAAA
ATCTACAGAA TAAGTAAGAG AGAGGACATT TTAAATAACT TCGTAAAAGA AGCTATTTCA
AAAATTGAGA TAAGAAAATA TTTTAAATCA AATAATATTT TGCCTCCATA TCCTATGTAA
 
Protein sequence
MNYFKLKYIK YFIFILFLYI LFSILTRIVN IYTLLFLIIT MYIFYNIDKK LFKKIVYKVI 
YKNKKNTLSF KNTYGAAKIS LEGIEKINKK INDKVKVELI NYQKNKLESQ LKTGDYKVTL
FGAGSSGKTS IARSLLKNIV GQTSAKIGTT KEINSYKIRI PILKRNINII DTPGLFEPSK
LGEEREKTTI IQASNSDLVL FVLDQDINKY ENYLIKELLK IGKKIIIVLN KCDLRSWDEN
NLIKENIISI TSAKKNKISV VKTIAVPQQS PYVKSDALNL VPEVGSLFKE IIETLDNNGE
ELLADNILFR SNKLGIKSKN FVQEQRYLMS NKVINKYMWV TGGVILVNPL PAVDFLTTTS
VNLQMIMELS KIYEIKLTKK DAKDLSKSLL SALAKQGILK GGLAILSPAL ATSLTKIIIS
KSIQSITTGW LIKIVGLSLI EYFKNGQDWG DGGIQEVVDK IYRISKREDI LNNFVKEAIS
KIEIRKYFKS NNILPPYPM