| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0871 |
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| Symbol | secF |
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| ID | 3765672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 805432 |
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| End bp | 806346 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 637797393 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_397367 |
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| Protein GI | 78779255 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0139488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTACA ATCTTGAACT AATAAAAAAT AAAAGAAAGA TAATTAGTTT TTCAACTTTT
CTTATTTTGT TCAGTCTTTT AGGAATTTTA TTTTCAACTT TTAATACTTC TTATAGGAAA
CCTATAAATT TAGGGATGGA TTTTGTTGGG GGAAATGAAC TAAGAATAGA AAGAGTTTGT
GAAGAAGAAT GTTCTAATCT TTCCCCTGAT TTTGTTTTAG ATAATTTAAG AGTGATCTCT
AGTAATAAAA ACTTTATAAA TAATATTAAA TTACAATTCC AAAATAATAA TAAATTAATT
TCAATAAGAA CACCTTATTT GAGTATCGAA GAATCAAATA ATCTAATTAC TAATCTTGAT
AATATTATTG GGCCTCTAAA TTATGAGAGT AAGGATTCAA GATTAATAGG TCCAAAGCTT
GGGAAAAGAC TACTTACCAA TTGTGTTACT TCATTGTTAG TTTCTTTATT TGCAATATCT
TTATATATAA CTATTAGGTT TGATAAAAAA TATGCATTAT TTGCATTATT AGCTTTATTT
CATGATTTAT TAATTGTTTT CGGTATATTC TCTTGGTTGG GAATTATATT ATCTGTCGAG
GTAAATAGTT TATTTGCGGT GTCCTTGTTA ACTATTGCTG GTTATTCTGT AAATGATACT
GTTGTTATTT TTGATAGAAT TCGTGAGAAT TTAAAATCAA AGGAAGAAGG CTATAACGAA
ACTATTCAAT TATCAGTAAA CGAATCATTT AGGAGAACAA CTTTTACCAG TATTACAACC
CTTATCCCTT TATTAAGCAT AATTTTGTTT GGATCTTACT CGCTGTTTTG GTTTTCTTTG
GCCTTATCAT TAGGAATTAT TGTTGGAAGT TATTCAAGTA TTTTATTGGC TCCATCTTTG
TTGCTTAAAG ATTAA
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| Protein sequence | MNYNLELIKN KRKIISFSTF LILFSLLGIL FSTFNTSYRK PINLGMDFVG GNELRIERVC
EEECSNLSPD FVLDNLRVIS SNKNFINNIK LQFQNNNKLI SIRTPYLSIE ESNNLITNLD
NIIGPLNYES KDSRLIGPKL GKRLLTNCVT SLLVSLFAIS LYITIRFDKK YALFALLALF
HDLLIVFGIF SWLGIILSVE VNSLFAVSLL TIAGYSVNDT VVIFDRIREN LKSKEEGYNE
TIQLSVNESF RRTTFTSITT LIPLLSIILF GSYSLFWFSL ALSLGIIVGS YSSILLAPSL
LLKD
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