| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0859 |
|---|
| Symbol | |
|---|
| ID | 3765660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 794531 |
|---|
| End bp | 795421 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 637797381 |
|---|
| Product | integral membrane protein, DUF6 |
|---|
| Protein accession | YP_397355 |
|---|
| Protein GI | 78779243 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.24873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATA TCGCAGTATT AGAAAAAAAA TTTAATTCTT TGAATAAATT TAATTTGGTA
TTTGCTTCAT TCTTCTTTAG TTTGATGACT TTGTGCGTAA AAAATATTGA TGAAAGGATA
CCTATTTATG AATTAGTTTT TTTCAGATCA TTTATAAGTT TAATGATTAC ATTATTCATA
ATTAATCTAA AAAATATAAA TCCTTGGGGC AAAAATAGAC CATTACTTAT CTTAAGAGGT
GTTTTAGGAA CATTAGCTTT AGTTTGTGTT TTTTATGCGA TAAGAAATAT GCCCCTTAGT
ATATCTACAG TTATTCAATA CACATATCCC ATTTTTATAT CTATATTTGC TGGCATATTT
ATAAACGAAA AAATAACTCG GAATATAATT ATTGCTTTAA TTATTGGCTG GATTGGAATA
TTAGTAATAA TTAATCCTAG TCAATTATCT TATATAAACG TTGAAATTGA AAATGTTTCG
ATTTCAATAG CATTTCTTGG TGCAATCTGC ACTGCATTGG CTTACGTTAC AGTTAAGAAA
CTTTCATTTA CTGAAGATGT TTATGTAATT ATTGAATATT TCCCACTTGT TTCTTTTATA
ACTCTATTGC CAATTGTATT AATGAACTGG GTTACCCCAA ATTGGAATGA ATTAGTTTGG
ATAATGGGTA TTGGCTTATT TACTCAATTA GGTCAGACTT TCTTAACAGT AGGTTTAAAA
AATTTACCTG CTTCTGAAGC TTCAACAATT AACTATTTGC AAGTTTTATT TGGGTCAATT
TGGGGAGTTT TGTTTTTCAG TGAAATAATT AACATTAATT TTTTATTAGG GGCCTCATTA
GTTTTATTAG GAACTATTAT TTCTACTACC AAAATAATCA AAAAGACATA G
|
|---|
| Protein sequence | MINIAVLEKK FNSLNKFNLV FASFFFSLMT LCVKNIDERI PIYELVFFRS FISLMITLFI
INLKNINPWG KNRPLLILRG VLGTLALVCV FYAIRNMPLS ISTVIQYTYP IFISIFAGIF
INEKITRNII IALIIGWIGI LVIINPSQLS YINVEIENVS ISIAFLGAIC TALAYVTVKK
LSFTEDVYVI IEYFPLVSFI TLLPIVLMNW VTPNWNELVW IMGIGLFTQL GQTFLTVGLK
NLPASEASTI NYLQVLFGSI WGVLFFSEII NINFLLGASL VLLGTIISTT KIIKKT
|
|---|
| |