| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0663 |
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| Symbol | prfC |
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| ID | 3765464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 625590 |
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| End bp | 627227 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637797185 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_397160 |
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| Protein GI | 78779048 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.635496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTTAG GTACTAAAAT TTTAAATAAT AAAGATATTC TGGATGCTGT AAATAAACGA
AGAAACTTTG CAATTATTTC GCATCCAGAT GCGGGCAAAA CAACGCTTAC TGAGAAGCTT
CTTTTGTATG GAGGAGCCAT TCAGCAGGCA GGAGCAGTAA AGGCTAGAGG TAATCAGAGA
AAAGCTACTT CAGACTGGAT GGAACTTGAG AAACAAAGAG GTATTTCAAT TACTTCAACT
GTATTGCAAT TTGAATATGA AAGATCAGTA ATTAATCTAT TAGATACACC AGGGCACCAA
GATTTCTCAG AAGATACTTA TAGAACATTA GCGGCTGCTG ATAATGCAGT TATGCTGGAA
GATGCTGCTA AGGGGCTAGA ACCCCAAACT AGAAAATTGT TTGAAGTGTG CAAGATGAGA
AAAATACCAA TATTTACTTT CATAAATAAA ATGGACAGGG CTGGAAGAGA GCCATTTTCT
TTACTTGATG AAATCGAATC AGAACTAGGA TTAAACACTT TACCGATTAA CTGGCCAATT
GGAAGTGGAG AGGAATTTAG GGGAGTTATT GATAGGTTTT CAAGAGAGGT GATTTTATTT
GATAAAGCAG TAAGAGGAAA ACAATCGAAT GAGAAGAGGT TAAGTCTTGA AGATAAAGAC
CTATCAAAAT ATGTAGAGAA AGAGTTGCTT GAGATATCAC TTGAAGAATT GGAGGTTCTT
GATGAGGCAG GATCGAAATT TGAAGAAGAA AACGTATTTA ATGGCTCCTT AACGCCTGTT
TTCTTTGGAT CTGCCATGAC TAATTTTGGT GTAAGACCAT TTTTAGATAG TTTTCTAAAA
ATGGCTCAAA AACCAACGTC AAGAAATAGT AATAAAGGGG ATATTGAACC TGCAAGTAAT
GAATTTAGTG GGTTTGTTTT TAAGCTTCAA GCAAACATGG ATCCAAAGCA TAGAGATAGA
GTTGCTTTTA TAAGAGTTTG TAGTGGGAAA TTTGAAAAGG ACATGTCAGT TAAACATTCC
AGAACTGGGA AAACAATAAG ATTATCAAGA CCACAAAAAA TATTTGGACA AGACAGAGAA
GTGGTTGATG ATGCGTATCC TGGTGATGTT ATTGGCTTAA ATAATCCAGG AATGTTTTCT
ATTGGAGATA CACTTTACAC AGGTACGCAT ACTGAGTATG AGGGCATACC ATCCTTTAGT
CCTGAAATAT TTAGCTGGTT GAGAAATCCC AATCCTTCAG CATTTAAAAA CTTTAGAAAG
GGTGTGAATG AACTTCGTGA AGAAGGTGCT GTTCAGATTC TTTATGACTT TGATGAGAGT
AAAAGAGATC CTATACTTGC AGCCGTTGGT CAATTACAGT TGGAAGTAGT AACTCACAGG
TTAAAAAATG AATATGGAGT AGATGCAAAT CTTGAATCAA TGCCATATCA ATTGGCTAGA
TGGGTTTCTG ATGGATGGCC AGCTATTGAA GAACTAGGCA GAATTTTCAA TTGTAAAATA
GTTAAAGATT GTTGGAATAG ACCAGTTATT CTTTTTAAAA ACGAGTGGAA TCTAAATCAA
TTTGTTGAAG ATAACAATCA CTTAAATTTA AACAAAGTTG CTCCTGTTGT TAGTGGAGTT
GAGCCAATTG TTTTATAA
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| Protein sequence | MTLGTKILNN KDILDAVNKR RNFAIISHPD AGKTTLTEKL LLYGGAIQQA GAVKARGNQR
KATSDWMELE KQRGISITST VLQFEYERSV INLLDTPGHQ DFSEDTYRTL AAADNAVMLE
DAAKGLEPQT RKLFEVCKMR KIPIFTFINK MDRAGREPFS LLDEIESELG LNTLPINWPI
GSGEEFRGVI DRFSREVILF DKAVRGKQSN EKRLSLEDKD LSKYVEKELL EISLEELEVL
DEAGSKFEEE NVFNGSLTPV FFGSAMTNFG VRPFLDSFLK MAQKPTSRNS NKGDIEPASN
EFSGFVFKLQ ANMDPKHRDR VAFIRVCSGK FEKDMSVKHS RTGKTIRLSR PQKIFGQDRE
VVDDAYPGDV IGLNNPGMFS IGDTLYTGTH TEYEGIPSFS PEIFSWLRNP NPSAFKNFRK
GVNELREEGA VQILYDFDES KRDPILAAVG QLQLEVVTHR LKNEYGVDAN LESMPYQLAR
WVSDGWPAIE ELGRIFNCKI VKDCWNRPVI LFKNEWNLNQ FVEDNNHLNL NKVAPVVSGV
EPIVL
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