Gene PMT9312_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0617 
Symbol 
ID3765417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp582525 
End bp583319 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content27% 
IMG OID637797138 
Productglutamate racemase 
Protein accessionYP_397114 
Protein GI78779002 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACTTA AAATAGGTAT ATTTGATAGT GGAATAGGTG GATTTACTAT TCTCAATTCT 
TTACTAAAAA CACGTAATGA TGTTGAAGTT TTTTATTTGG CGGACACTAA AAGAATCCCT
TTTGGGGACA AAAATTTTGA AGAGATCAGA CTAATTGCAA AAGAGATTTG TAATTTTTTT
GAAGATAAGA ATTTGGATGC TCTTTTAATA GCTTGTAACA CTACAAATGC ATGTGCACTA
GATATTCTAG AAAATGACTT AAAGATACCA TGTTTTGACC TTATAAACTC AGTATCAGAA
ATAGTTAATA AACAAATAAT TGGCATCTTG GCAACAAAAA CAACAGTTAG ATCTTCATAT
TACAAAAACG CTATAAGTTC TAAAAAGGAG AATTCGAAAA TATTTCAAAA TGAATGTCCA
GAATTTGTAT CAGAAATTGA AAGAGAAAAG CTTGATTTTA TTAAGTTAAA TAATCTTTCG
GATTTGTATT TAAAACCACT ACTAAATAAA AATATTGAAG AAATAATACT CGGATGTAGC
CATTATCCTT TAATTTATGA ATTTTTGAGA AAAAAAATAA GCTCAAATAT AAAAATTATT
GATCCATCGG AAGCGTTAAT AAAAAAATTT AATGAATCTT TTGCTATTCC AAAAACTGAC
CGCTATGAGA GTCTTTCTTT CGAAAATGTA AAATTTTTTG TTACTTCAGA AAGAGATAAA
TTTTCCAAAA AAGTAAAATT TTGGCTTGGA ATTAATAAAG AAATTAGTTT GGTTAACCTC
CGAAGTAATG TTTGA
 
Protein sequence
MKLKIGIFDS GIGGFTILNS LLKTRNDVEV FYLADTKRIP FGDKNFEEIR LIAKEICNFF 
EDKNLDALLI ACNTTNACAL DILENDLKIP CFDLINSVSE IVNKQIIGIL ATKTTVRSSY
YKNAISSKKE NSKIFQNECP EFVSEIEREK LDFIKLNNLS DLYLKPLLNK NIEEIILGCS
HYPLIYEFLR KKISSNIKII DPSEALIKKF NESFAIPKTD RYESLSFENV KFFVTSERDK
FSKKVKFWLG INKEISLVNL RSNV