| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0569 |
|---|
| Symbol | |
|---|
| ID | 3765368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 531569 |
|---|
| End bp | 532618 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637797089 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_397066 |
|---|
| Protein GI | 78778954 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0418] Dihydroorotase |
|---|
| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0733967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGACAT TAACCATAAT AAAACCTGAT GATTGGCATT TACATTTAAG AGAAGGTCTT
GTATTAAAAA ATATCATTCA TTTTACTTCA GAATTTTTTG GAAGAGCTAT CGTTATGCCA
AATACTAAAA TTCCCATAAC AACTATTGAT GGCGCTATTT CTTACAAAAA ATCTATTGTT
GAAGCGTTAC CAGAAAGTTC TAAGTTTGAA CCATTAATGA CAATGTATCT TACAGATGAG
ACTGATAAAG GAGAACTAAT AAATGGTTTC AAAAATAATG TTTTTTTCGC AGCAAAATTA
TATCCTGCTA ATGCCACAAC AAATTCCATT CATGGAGTTA AGAAAATAAA AAATCTATAT
AAGATCTTTG AATCAATGCA AGATTCTGGA ATGCCTCTTC TAATTCATGG GGAAGTGACT
GATTCTGAAG TGGATGTATT TGATAGAGAA GAAGTTTTTA TAGATAGAGA ACTTTCCCAA
ATAACTAAAA GATTTCCAAA ATTAAAAATC GTTTTAGAAC ATATAACCAC CTCTTATGCA
GTGGATTTTG TTCAAGAAAA TAATATTGGA GCTACTATCA CTCCCCATCA TTTGCACATA
AATAGAAATG CAATGTTTTT TGGAGGCTTA AATAGTGATT TTTACTGCTT ACCTGTGGCT
AAGAGGGAAA AAAATAGACT GGCTTTGAGG AAAGCTGCAA CAAGTGGGAA AGAATGTTTT
TTCTTGGGAA CTGACTCTGC TCCACACCTA AGAAAGTGGA AGGCTTTTTG TGGTTGTGCA
GGTATTTTTA ATTCGCCAGT AGCAATAGAA AGCTATTTAA CTGTATTTGA AGAGGAAAAT
GCTCTAGATA ATTTTGAGAA GTTTGCAAGT TTGAATGGCT CTGATTTTTA TAATTTGCAC
CCAAATAAAG AAAAATTAAA ATTAGTGTCT AAACCTAATA AAATTAAAGA ATATATTGAT
GTTGTTGAAG AAAAAAATAT TGTCGGACAA ATAAAACCAT TTCATGCAGG TGAAACTTTA
CAATGGCATG TAGAAGGGAT TGTAAATTAA
|
|---|
| Protein sequence | MKTLTIIKPD DWHLHLREGL VLKNIIHFTS EFFGRAIVMP NTKIPITTID GAISYKKSIV
EALPESSKFE PLMTMYLTDE TDKGELINGF KNNVFFAAKL YPANATTNSI HGVKKIKNLY
KIFESMQDSG MPLLIHGEVT DSEVDVFDRE EVFIDRELSQ ITKRFPKLKI VLEHITTSYA
VDFVQENNIG ATITPHHLHI NRNAMFFGGL NSDFYCLPVA KREKNRLALR KAATSGKECF
FLGTDSAPHL RKWKAFCGCA GIFNSPVAIE SYLTVFEEEN ALDNFEKFAS LNGSDFYNLH
PNKEKLKLVS KPNKIKEYID VVEEKNIVGQ IKPFHAGETL QWHVEGIVN
|
|---|
| |