| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0291 |
|---|
| Symbol | |
|---|
| ID | 3765079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 279805 |
|---|
| End bp | 280650 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637796800 |
|---|
| Product | putative ABC transporter |
|---|
| Protein accession | YP_396788 |
|---|
| Protein GI | 78778676 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.324707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAGAA GCTTACGAGA TTCAATAGTT GGATTTTCCT TACTGGGAGG AATCTTAACA
TTCACATTTT TTTCTTTTTG GCTCAAAGGA GTAAGATTAT CCTCAAAAAA TTGGCACCTT
TTTGCCGAAT TCAATAACGC AAGCGGTTTA TCAAAAAAAT CTCCAGTTAC TTATAGAGGA
ATTTTAGTAG GTTCAATAGA TGATATTTTG TTTACTAATG AATCAATTCA AGCAAAAATA
GTTTTAAATA ATCCTGAAAT TATTCTTCCC AAGCCAGCAT TTGCAAGAGT AGTTACTAAT
TCTTTCCTTG GAGGAGATGT CCAAGTCGCT TTAGAAACTA GTGAAAAAAC AATTTCTAAA
AACATCGCAA AACCTACATC CGAAAAATGC GATAGCAAAT TAATTATTTG TCAGGGAGAT
ACAATCACAG GGAAACAACT ATCAAGTCTG TCAAATATAA CAAATAGACT TAGCCAGCTT
CTAAAAGAAT CAAATCAAGA AAACATAATT GAAAATATTG TTAAATCAAT TGACCAATTT
GATAGAACCC AAGAAAACCT TGATGAACTA ATTTATTTAT CAAAGCAAGA AATACTAAGA
ATTGAGCCTT TAATAAATGA AATCACAATT GCTGCTAATC ATTTAAATAA GATTTTATCT
ACTATTGACA ATGAAGAAAC ACTCAACGAC ATTAAATTGA CAATTAATGC TGCAAGCTCG
ATCTCCAGCA AAATGGATGA TGTGAGTGAT GATTTTGTAA AATTAACAAA AGATAAAGAA
TTAACCAAAT CTATAAGGGA CTTAACTATT GGACTGTCAA AATTTCTTAA CGAAATTTAT
CCATAA
|
|---|
| Protein sequence | MRRSLRDSIV GFSLLGGILT FTFFSFWLKG VRLSSKNWHL FAEFNNASGL SKKSPVTYRG
ILVGSIDDIL FTNESIQAKI VLNNPEIILP KPAFARVVTN SFLGGDVQVA LETSEKTISK
NIAKPTSEKC DSKLIICQGD TITGKQLSSL SNITNRLSQL LKESNQENII ENIVKSIDQF
DRTQENLDEL IYLSKQEILR IEPLINEITI AANHLNKILS TIDNEETLND IKLTINAASS
ISSKMDDVSD DFVKLTKDKE LTKSIRDLTI GLSKFLNEIY P
|
|---|
| |