Gene PMT9312_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0271 
Symbol 
ID3765058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp259288 
End bp260424 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content33% 
IMG OID637796779 
Producttwo-component sensor histidine kinase 
Protein accessionYP_396768 
Protein GI78778656 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCT CAAAAAAATT TGAAGAACTA GTCATAAAAC AGCTAGAGAG TTTTGGTTGC 
TCAATGGGAG TTACTCATTT AGTTATGTAT CTTGCTTCAG CTAACCAAGG AACTAAAGCA
TCTTTTGAAA TGATTGGTCA ATGGCCACAA ATTGATAGGC TTCTAATATC AATAGAAGAT
GATCCTTCAC TCAAAGTTTC TTCTCCTAAT AGAAGATGGT ACCCGCTTCA AGAAAACGAT
ATTCTACTTG GTGTCCTTAG GGTAGAAACT GATTTGAAAG GGGGGAATTG GCCAGTATCT
CTTGATTCTA GATTAAAAGC ACTATCAATA TCTTTAGCTA AATGCGTTTC TATCGAATTA
GAACGTCAAA ATAAAAATGA AGAAATCAAT TATTTAAAAA ATCAGGTCAA TGTCATAATC
CATCAATTGA GGAATCCATT GGCTGCTCTC AGGACATATG CAAAATTACT AATAAAAAAA
CTTGGTTCAG ATGATGATTC TATTGAGATA GTCGAACGCA TGATAATAGA GCAAAAACAA
ATTAATCAAT ATATGGACTC TTTTGCGAAA TTAAATACAT CTATTCAACT TCCTTTAGAA
ATTGGAGAAG AAAGATTATT ATTACCACCA AATTTAGATA ATAATAAGGT AATAACTGTT
CAGAGTTTAT TGAGGCCAAT TTTAGAAAGG GGTAAAGCTA ATGCGAACTT AGAGAATAGA
GATTGGACTG AACCTTCTCT TTGGCCACGT TGGACTTTAT CGCCATTAAA GGCAAAATAT
GCTGTAATTG CTGAAATTGT GGCTAATTTA TTAGAAAATG CGTTTAAATA TGCCCAACAA
GATGCTGAGA TTGGACTCAC CATTACGAGT AAAGGTATGT GCATATTTGA TGATGGAAAA
AAAATAACCA AAAATGAAAA TGAGAAGATT TTTCAAAAAG GCTTTAGAGG ATCTGCCGCT
AAGAAGAAGG ATGGTACTGG TGTGGGACTT TTTTTAGCGA GAAAATTAGC AAAACAAATT
GGAGGAGAGT TGAGATTGCT GGAAAATTAC TCAATTGATA ATACTGAGGA ATTAAAAAAT
CTTAAGAAGA AAAATATTTT CTACTTAGAG CTTCCTATAA AAGAATTGAA TGCATAA
 
Protein sequence
MNLSKKFEEL VIKQLESFGC SMGVTHLVMY LASANQGTKA SFEMIGQWPQ IDRLLISIED 
DPSLKVSSPN RRWYPLQEND ILLGVLRVET DLKGGNWPVS LDSRLKALSI SLAKCVSIEL
ERQNKNEEIN YLKNQVNVII HQLRNPLAAL RTYAKLLIKK LGSDDDSIEI VERMIIEQKQ
INQYMDSFAK LNTSIQLPLE IGEERLLLPP NLDNNKVITV QSLLRPILER GKANANLENR
DWTEPSLWPR WTLSPLKAKY AVIAEIVANL LENAFKYAQQ DAEIGLTITS KGMCIFDDGK
KITKNENEKI FQKGFRGSAA KKKDGTGVGL FLARKLAKQI GGELRLLENY SIDNTEELKN
LKKKNIFYLE LPIKELNA