Gene PMT9312_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0263 
Symbol 
ID3765050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp250473 
End bp252056 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content28% 
IMG OID637796771 
Productintegral membrane protein MviN 
Protein accessionYP_396760 
Protein GI78778648 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCAT TTTTTAAAAA TAATGTTTTT TCAATTTCAT TTGGTACTAG TCTTAGTAAA 
TTAGCGGGAT GTATAAGACA AATATTTATA GCTGCTGCTT TTGGGGTTGG GGTAACTTAC
GACGCATTTA ATTATGCCTA TATAATTCCT GGTTTTTTGC TAATAATCAT TGGAGGAATT
AATGGCCCTT TACATAATGC AGTAGTAGCA GTTTTAACTC CTCTTAACAA AAAAAATGGA
GGGATTGTTC TTACTCAAGT AAGCATAAAA CTTTCAATAT TATTATGCAG TTTAGCTATA
TTGATTTACT TTAATTCCAA TTTATTAATT GATTTATTAG CCCCCAATTT AAGTTACGAA
GCTAAATCTA TTGCCACTTA CCAATTAAGA ATACTTACAC CTTGTATACC ATTATCTGGC
TTTATAGGTT TAAGCTTTGG AGCCTTAAAT TCTCAAAGAA AATTCTTTTT ATCAAGTATA
AGCCCAGCCA TAACAAGCAT AACTACAATT TTTTTTATTC TATTTAGTTG GATATTCAAC
ACAGAAAATT CATCTTCAAA TTTCCTCACT TATTCGGGGT TACTAGCTTT TGCAACTTTG
ACAGGAACTT TTATTCAGTT TGTTGTTCAA ATTTGGGAAA TAAATAAAAG CGGTCTCTTG
AGATTAGAGT CAACTTTCCA ATTGTTTAAA GATGAAGAGA GAAGAATTTT CAACCTAATT
TTTCCAGCAT CTATCTCATC AGGTCTAAGT CAAATTAACG TTTTTATTGA TATGTTTTTT
GCTTCCAGTT TTCAAGGAGC AGCATCTGGA CTAGCTTACG GAAATTTTCT TATACAAGCC
CCATTAGGCA TATTATCCAA CTCTTTAATT TTGCCATTAC TTCCAAAATT TTCTAAATTG
AGAAGTTATA AAGACTCCAG AGGATTCCAA AAAAAATTAA TCTCTGGAAT AGAGTACTGT
TTCTTGACAA CTATTTTTTT AACTGGATTT TTCATAACCT TCAATAACCA AATTGTTCAA
TTAGTTTTTC AAAGAGGAGT CTTTGATTAT TCAGCCACCT TAAAAGTGAA GAATATATTA
ATTGCTTATG GATTTGGAAT ACCTTTTTAT CTTTATAGAG ATTTATTAGT AAGAACTTAC
TATTCAATAG AAAAAACAAA ATTTCCTTTT AAGTTGTCAT TCGCAGGGAT CATATTTAAT
ATCTTTTTTG ATTGGTTTTT AATTGGTGCA CCAATTAAGA ATTTTGGAAA TCTTTCACCA
TATAATTTTG GAGTTGTAGG AATAATCTTA TCTTCAGTAA TAGTCAACTT TATAGTTTGT
ATTTTGCTTT CTTTAAATCT GCGAAATGAA GATATCCATT TGCCTAACTT GGATTTATTG
AAAAAAATTA CTCTGATGTC ATTAGCATCA TTTTTAGATA GTACACTTTG TTTGACTATT
TTCAAAACTA AGAATAACTT TAATTCAAAT TTTGGAGGAT TTTTATTATT AATATTTGGA
TCTCTAACTT TTTTTGTAAT TTATTTTTTA CTTACAAAAT GTTTGAACGT AAATAAATTT
AAAATTTATC AAAAAAAGAT TTAG
 
Protein sequence
MHSFFKNNVF SISFGTSLSK LAGCIRQIFI AAAFGVGVTY DAFNYAYIIP GFLLIIIGGI 
NGPLHNAVVA VLTPLNKKNG GIVLTQVSIK LSILLCSLAI LIYFNSNLLI DLLAPNLSYE
AKSIATYQLR ILTPCIPLSG FIGLSFGALN SQRKFFLSSI SPAITSITTI FFILFSWIFN
TENSSSNFLT YSGLLAFATL TGTFIQFVVQ IWEINKSGLL RLESTFQLFK DEERRIFNLI
FPASISSGLS QINVFIDMFF ASSFQGAASG LAYGNFLIQA PLGILSNSLI LPLLPKFSKL
RSYKDSRGFQ KKLISGIEYC FLTTIFLTGF FITFNNQIVQ LVFQRGVFDY SATLKVKNIL
IAYGFGIPFY LYRDLLVRTY YSIEKTKFPF KLSFAGIIFN IFFDWFLIGA PIKNFGNLSP
YNFGVVGIIL SSVIVNFIVC ILLSLNLRNE DIHLPNLDLL KKITLMSLAS FLDSTLCLTI
FKTKNNFNSN FGGFLLLIFG SLTFFVIYFL LTKCLNVNKF KIYQKKI