| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0238 |
|---|
| Symbol | |
|---|
| ID | 3765023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 229042 |
|---|
| End bp | 229842 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637796744 |
|---|
| Product | beta-carotene hydroxylase |
|---|
| Protein accession | YP_396735 |
|---|
| Protein GI | 78778623 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATATTG AAGGTACTGT AATTCATGAT GCATGTCATA AAGCGGCCCA TCCGGTACCT
TGGATAAATC AAGCAATGGG TCATGGCTCA GCAATTCTTT TAGGATTTAG TTTTCCAGTT
TTTACAAGAG TACATTTACA ACATCATATT CACGTAAATC ATCCCAAAAA TGACCCAGAT
CATATTGTCA GTACTTTTGG TCCAATTTGG CTAATTGCTC CGAGATTTTT TTATCATGAA
GTTTTTTTCT TTCAAAGGAA ACTTTGGCGA AAATATGAAT TACTCCAATG GGGAATTGAA
AGGTCAATCT TCATATCCAT AATCTTGGCA GGTATAAAGT TTGACTTCAT GAATCTAATC
TATAATCTAT GGTTCGGACC TGCATTAATG GTGGGAGTTA CTTTAGGAAT ATTTTTTGAT
TATCTCCCCC ATAGACCTTT TCGATCAAGA AACAAGTGGA TAAATTCTCG AGTTTATCCA
AGCAAATTTA TGAATTTATT AATAATGGGC CAAAATTACC ATCTTATTCA CCATCTTTGG
CCTTCCATTC CTTGGTTTGA ATACAAAGTA GCATATGAAA AAACTAAGCC ATTATTGGAT
ACGAAAGGCT CACCTCAAAG AGTTGGAATT TTTGAAAGTA AAGAAGACAT TTTTAACTTT
ATTTATGATT TATTTATAGG TATAAGGAGT CATAGCAAAA AGAGAGGTAA AATAAGGAAA
ATTATAAATT TGTATCCAGG CTATAAAATA AAAAAAGTTT TATTAAAGAT AGTTAATAAA
ACTTTTATAG GCAGCAAATA A
|
|---|
| Protein sequence | MHIEGTVIHD ACHKAAHPVP WINQAMGHGS AILLGFSFPV FTRVHLQHHI HVNHPKNDPD
HIVSTFGPIW LIAPRFFYHE VFFFQRKLWR KYELLQWGIE RSIFISIILA GIKFDFMNLI
YNLWFGPALM VGVTLGIFFD YLPHRPFRSR NKWINSRVYP SKFMNLLIMG QNYHLIHHLW
PSIPWFEYKV AYEKTKPLLD TKGSPQRVGI FESKEDIFNF IYDLFIGIRS HSKKRGKIRK
IINLYPGYKI KKVLLKIVNK TFIGSK
|
|---|
| |