Gene PMT9312_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0184 
Symbol 
ID3764969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp175372 
End bp175911 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content24% 
IMG OID637796691 
Producthypothetical protein 
Protein accessionYP_396682 
Protein GI78778570 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0937596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA AAATTATTTC TGAAATCAAT TTAGATTTGG TTTTTCAATG TAATGATTTT 
TCTCAATTTT CAAATAAGTT AAAAGATAGT AAAACTAAGC TTATTTTTGA ATCTATTTTT
TGGGAGAAAG TTTTTTTATC TTGGATAAAC ACAATATTAA AAAAAGAGGA TTATGAATTG
CCATATTATA TTTTTGAAAA AAAATCTTTT TCATTAGGAT TACAGATAAT ATCTAATCAA
GAAATTGCTT CTTTGAATAA GAAGTGGATG CAAAAAAATG GTCCAACTGA TGTTCTATCT
TTTCCAATCA TTTCTGATGA ATCTCTAAAT AATTTAGATC AAATAGAGTT GGGAGATATA
TTTATATCAT TAGAGATGGC ACTTGAGCAA TCTTATGAAT ATAAACATTC AATCTATAGA
GAGATGATCT GGTTGGCTAG TCATGGATTT TTACATCTTT TGGGATGGGA ACATAATAAT
GAACATGATT TAGAAAATAT GTTAAATTTT CAAGAATATT TAATTACTCG ATTAAATTAA
 
Protein sequence
MKEKIISEIN LDLVFQCNDF SQFSNKLKDS KTKLIFESIF WEKVFLSWIN TILKKEDYEL 
PYYIFEKKSF SLGLQIISNQ EIASLNKKWM QKNGPTDVLS FPIISDESLN NLDQIELGDI
FISLEMALEQ SYEYKHSIYR EMIWLASHGF LHLLGWEHNN EHDLENMLNF QEYLITRLN