| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0149 |
|---|
| Symbol | |
|---|
| ID | 3764934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 143451 |
|---|
| End bp | 144410 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637796656 |
|---|
| Product | putative Rubisco transcriptional regulator |
|---|
| Protein accession | YP_396647 |
|---|
| Protein GI | 78778535 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAT TACCATTTAC TCTCGATCAA TTAAGAATAC TAAAAGCAAT AGCAGCTCAA
GGAAGTTTTA AAAAAGCTGC AGATCTCTTA TATGTAACCC AACCTGCTGT AAGTTTACAA
ATTCAAAATC TAGAAAAACA ACTTGAAATT ACAATTTTCG ACAGAGGCGG TAGAAAAGCT
CTTTTAACTG AAGCAGGAAG ATTACTACTT GAATATTGTG AACGAATTTT GAATCAATGC
GACGAAGCTT GTAAAGCTAT CGAAGATTTA AATAGTTTAA AAGGTGGGAC TCTTGTCATT
GGAGCCAGTC AAACAACAGG AACTTATTTA ATGCCAAGAA TGATAGGAGT ATTCAGACAA
AAATATCCTG ATGTATCAGT TCAACTTCAG GTGCATAGTA CTAGAAGAAC TGGATGGAGT
GTTGCCAATG GACAAATTGA CTTAGCCATT ATTGGAGGAC AATTACCTGG AGATTTAGAA
AACTTACTAC AAGTAATTCC ATATTCGACA GATGAGTTAG CACTTGTTTT ACATTCCAAA
CACCCACTTT CTAACAAAAA AGAACTTTTA AAAGAAGATT TATATAAATT AAATTTTGTA
ACGTTGGATT CTCAATCTAC AACCAGAAAA GTTGTTGATA AACTTCTTCA AGATTCTGGA
CTTGATATTC AACGATTAAA AATTGAGATG GAACTTAACT CTCTTGAAGC AATTAAGAAT
GCAGTTCAAT CAGGTCTAGG AGCTTCGTTT TTACCTGTTG TTTCAATTGA AAGAGAATTA
GCGGCTGGAA CAATCCATAA AGCATTTGTT GCTGACTTAG AGGTTAAAAG AGAACTGAAA
TTAATTACTA ATCCATCAAG ATATACATCA AGAGCATCAG AAGTTTTTAA GAAAAATATT
CTTCCACAAT TTGCTAGTTT AAAAAGTCCA TTAAGGCAAA TAAATTTTGA TCAGAACTGA
|
|---|
| Protein sequence | MPELPFTLDQ LRILKAIAAQ GSFKKAADLL YVTQPAVSLQ IQNLEKQLEI TIFDRGGRKA
LLTEAGRLLL EYCERILNQC DEACKAIEDL NSLKGGTLVI GASQTTGTYL MPRMIGVFRQ
KYPDVSVQLQ VHSTRRTGWS VANGQIDLAI IGGQLPGDLE NLLQVIPYST DELALVLHSK
HPLSNKKELL KEDLYKLNFV TLDSQSTTRK VVDKLLQDSG LDIQRLKIEM ELNSLEAIKN
AVQSGLGASF LPVVSIEREL AAGTIHKAFV ADLEVKRELK LITNPSRYTS RASEVFKKNI
LPQFASLKSP LRQINFDQN
|
|---|
| |