Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0134 |
Symbol | |
ID | 3764919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 130669 |
End bp | 131190 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637796641 |
Product | photosystem I assembly protein Ycf3 |
Protein accession | YP_396632 |
Protein GI | 78778520 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.820284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTAGTA ATCAAAACAG AGACAATTTT ATTGATAAAG CTTTTACTGT AATTGCTGAA TCAATAGTTA AAATAATGCC TATTGAAGAG AAAGAAAAAA AGGCTTACAT CTACTATAGA GATGGGCTGG CAGCCCAAAA TAATGGAGAT TATTCCGAAG CATTAGAGTA TTACAAAGAG AGTTTACTAC TTGAAGAAAA TAAAATAGAT AGGGGTGAGA CTCTTAAAAA TATGGCAATT ATATTTATGA GTAATGGTGA AGAGGATTTG TCTATAGAAA CTTATGAAAA AGCATTGGTA GAAAATCCTA AACAGCCATC ATGCCTAAAA AACATAGGTT TAATTTATGA AAAAAGAGGG AGAAATGCTG AACAAAATGG TGATTTAGAT CAGAGAGATA TATGGTTTGA TAAAGCTGCT GAAGTTTGGA CTAAAGCAGT AAAATTATAT CCTGGGGGGT ATCTTGATAT TGAGAATTGG CTGAAAAACT CAGGAAGAAG TTCAATTGAT ATGTATCTCT AA
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Protein sequence | MPSNQNRDNF IDKAFTVIAE SIVKIMPIEE KEKKAYIYYR DGLAAQNNGD YSEALEYYKE SLLLEENKID RGETLKNMAI IFMSNGEEDL SIETYEKALV ENPKQPSCLK NIGLIYEKRG RNAEQNGDLD QRDIWFDKAA EVWTKAVKLY PGGYLDIENW LKNSGRSSID MYL
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