Gene PMT9312_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0134 
Symbol 
ID3764919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp130669 
End bp131190 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content32% 
IMG OID637796641 
Productphotosystem I assembly protein Ycf3 
Protein accessionYP_396632 
Protein GI78778520 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.820284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTAGTA ATCAAAACAG AGACAATTTT ATTGATAAAG CTTTTACTGT AATTGCTGAA 
TCAATAGTTA AAATAATGCC TATTGAAGAG AAAGAAAAAA AGGCTTACAT CTACTATAGA
GATGGGCTGG CAGCCCAAAA TAATGGAGAT TATTCCGAAG CATTAGAGTA TTACAAAGAG
AGTTTACTAC TTGAAGAAAA TAAAATAGAT AGGGGTGAGA CTCTTAAAAA TATGGCAATT
ATATTTATGA GTAATGGTGA AGAGGATTTG TCTATAGAAA CTTATGAAAA AGCATTGGTA
GAAAATCCTA AACAGCCATC ATGCCTAAAA AACATAGGTT TAATTTATGA AAAAAGAGGG
AGAAATGCTG AACAAAATGG TGATTTAGAT CAGAGAGATA TATGGTTTGA TAAAGCTGCT
GAAGTTTGGA CTAAAGCAGT AAAATTATAT CCTGGGGGGT ATCTTGATAT TGAGAATTGG
CTGAAAAACT CAGGAAGAAG TTCAATTGAT ATGTATCTCT AA
 
Protein sequence
MPSNQNRDNF IDKAFTVIAE SIVKIMPIEE KEKKAYIYYR DGLAAQNNGD YSEALEYYKE 
SLLLEENKID RGETLKNMAI IFMSNGEEDL SIETYEKALV ENPKQPSCLK NIGLIYEKRG
RNAEQNGDLD QRDIWFDKAA EVWTKAVKLY PGGYLDIENW LKNSGRSSID MYL